ELAVL4 (Tupaia belangeri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTBEG00000011730 T41773_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.797
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.797
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.797
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.774
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.774
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.774
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000010139 RRM 53 123
ENSTBEP00000010139 RRM 139 178
ENSTBEP00000010139 RRM 304 374

Links

Other RRM family RBPs
Other Tupaia belangeri RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL4 Echinops telfairi ENSETEG00000013779 I 1.000
ELAVL2 Choloepus hoffmanni ENSCHOG00000000635 I 0.962
ELAVL2 Otolemur garnettii ENSOGAG00000016228 I 0.956
LOC100051268 Equus caballus ENSECAG00000022284 I 0.840
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.840
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.840
Elavl4 Mus musculus ENSMUSG00000028546 I 0.840
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.840
CBF67567 Xenopus laevis CBF67567 I 0.840
CBU92440 Xenopus laevis CBU92440 I 0.840
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.840
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.840
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.840
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.840
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.840
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.840
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.840
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.840
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.840
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.840
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.840
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.840
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.840
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.840
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.840
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.840
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.840
ELAVL4 Homo sapiens ENSG00000162374 D 0.840
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.840
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.840
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.840
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.840
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.840
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.840
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.840
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.840
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.840
AAA96945 Xenopus laevis AAA96945 I 0.840
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.840
AAH99348 Xenopus laevis AAH99348 I 0.840
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.840
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.840
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.840
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.840
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.836
elavl4 Danio rerio ENSDARG00000045639 I 0.832
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.810
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.807
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.807
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.807
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.807
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.807
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.807
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.807
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.807
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.807
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.807
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.807
Elavl2 Mus musculus ENSMUSG00000008489 I 0.807
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.807
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.807
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.807
AAI70539 Xenopus laevis AAI70539 I 0.807
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.807
AAH94189 Xenopus laevis AAH94189 I 0.807
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.807
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.807
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.807
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.807
ELAVL2 Equus caballus ENSECAG00000020142 I 0.807
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.807
ELAVL2 Homo sapiens ENSG00000107105 D 0.807
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.807
AAA96943 Xenopus laevis AAA96943 I 0.803
Q91903 Xenopus laevis Q91903 I 0.803
CAA59430 Xenopus laevis CAA59430 I 0.798
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.797
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.797
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.797
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.797
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.796
elavl2 Danio rerio ENSDARG00000040732 I 0.788
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.778
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.778
elavl3 Danio rerio ENSDARG00000014420 I 0.778
AAA96944 Xenopus laevis AAA96944 I 0.775
AAI69769 Xenopus laevis AAI69769 I 0.775
Q91584 Xenopus laevis Q91584 I 0.775
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.775
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.774
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.774
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.771
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.771
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.770
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.769
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.769
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.769
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.769
ELAVL3 Homo sapiens ENSG00000196361 I 0.769
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.769
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.769
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.769
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.769
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.769
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.768
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.767
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.759
Elavl3 Mus musculus ENSMUSG00000003410 I 0.759
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.755
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.750
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.741
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.736