ELAVL2 (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000000635 T35233_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.797
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.797
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.797
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.774
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.774
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.774
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000000565 RRM 69 139
ENSCHOP00000000565 RRM 155 194
ENSCHOP00000000565 RRM 305 375

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

116 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL2 Otolemur garnettii ENSOGAG00000016228 I 0.995
ELAVL4 Echinops telfairi ENSETEG00000013779 I 0.962
ELAVL4 Tupaia belangeri ENSTBEG00000011730 I 0.962
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.844
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.840
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.840
Elavl2 Mus musculus ENSMUSG00000008489 I 0.840
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.840
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.840
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.840
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.840
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.840
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.840
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.840
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.840
AAI70539 Xenopus laevis AAI70539 I 0.840
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.840
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.840
AAH94189 Xenopus laevis AAH94189 I 0.840
ELAVL2 Equus caballus ENSECAG00000020142 I 0.840
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.840
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.840
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.840
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.840
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.840
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.840
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.840
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.840
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.840
ELAVL2 Homo sapiens ENSG00000107105 D 0.840
Q91903 Xenopus laevis Q91903 I 0.836
AAA96943 Xenopus laevis AAA96943 I 0.836
CAA59430 Xenopus laevis CAA59430 I 0.831
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.830
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.830
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.830
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.830
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.829
elavl2 Danio rerio ENSDARG00000040732 I 0.811
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.807
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.807
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.807
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.807
CBF67567 Xenopus laevis CBF67567 I 0.807
AAH99348 Xenopus laevis AAH99348 I 0.807
CBU92440 Xenopus laevis CBU92440 I 0.807
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.807
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.807
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.807
AAA96945 Xenopus laevis AAA96945 I 0.807
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.807
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.807
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.807
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.807
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.807
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.807
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.807
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.807
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.807
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.807
ELAVL4 Homo sapiens ENSG00000162374 D 0.807
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.807
LOC100051268 Equus caballus ENSECAG00000022284 I 0.807
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.807
Elavl4 Mus musculus ENSMUSG00000028546 I 0.807
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.807
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.807
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.807
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.807
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.807
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.807
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.807
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.807
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.807
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.807
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.807
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.807
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.807
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.807
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.807
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.807
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.803
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.802
elavl4 Danio rerio ENSDARG00000045639 I 0.799
elavl3 Danio rerio ENSDARG00000014420 I 0.774
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.774
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.774
Q91584 Xenopus laevis Q91584 I 0.770
AAA96944 Xenopus laevis AAA96944 I 0.770
AAI69769 Xenopus laevis AAI69769 I 0.770
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.770
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.769
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.766
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.766
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.765
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.764
ELAVL3 Homo sapiens ENSG00000196361 I 0.764
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.764
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.764
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.764
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.764
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.764
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.764
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.764
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.764
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.763
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.763
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.755
Elavl3 Mus musculus ENSMUSG00000003410 I 0.755
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.745
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.736
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.736
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.726
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.702
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.701
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.701