XM_002864670.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_8002097 T44456_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8002097 RRM 42 112

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GR-RBP3 Arabidopsis thaliana AT5G61030-TAIR-G N 0.986
mgf014059m Mimulus guttatus mgf014059m N 0.817
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.817
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.817
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.817
mgf012875m Mimulus guttatus mgf012875m N 0.817
mgf016144m Mimulus guttatus mgf016144m N 0.817
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.789
PK15111.1 Cannabis sativa PK15111.1 N 0.775
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.775
MDP0000635271 Malus x domestica MDP0000635271 N 0.761
ppa010113m Prunus persica ppa010113m N 0.761
mgf007732m Mimulus guttatus mgf007732m N 0.761
Glyma17g08630.1 Glycine max Glyma17g08630.1 N 0.761
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 0.761
30138.m003973 Ricinus communis 30138.m003973 N 0.746
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.732
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.718
MDP0000255642 Malus x domestica MDP0000255642 N 0.704
MDP0000302917 Malus x domestica MDP0000302917 N 0.704
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.704