MDP0000140238 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000140238 T57341_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000140238 RRM 50 120

Links

Other RRM family RBPs
Other Malus x domestica RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa011480m Prunus persica ppa011480m N 0.915
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.845
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.845
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.845
30190.m011248 Ricinus communis 30190.m011248 N 0.831
PK05232.1 Cannabis sativa PK05232.1 N 0.831
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.831
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.817
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.775
mgf011871m Mimulus guttatus mgf011871m N 0.775
SB07G019390 Sorghum bicolor Sb07g019390 N 0.761
B9GKF3_POPTR Populus trichocarpa POPTR_0001s09650 N 0.761
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.761
LOC_Os08g29650 Oryza sativa LOC_Os08g29650 N 0.761
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 0.761
Glyma10g41320.1 Glycine max Glyma10g41320.1 N 0.746
GRMZM2G031846 Zea mays GRMZM2G031846 N 0.746
gw1.19.297.1 Selaginella moellendorfii gw1.19.297.1 N 0.732
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.732
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.732
gw1.3.275.1 Physcomitrella patens gw1.3.275.1 N 0.718
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.718
Sb01g040100 Sorghum bicolor Sb01g040100 N 0.718
BRADI1G29180 Brachypodium distachyon BRADI1G29180 N 0.718
MDP0000238655 Malus x domestica MDP0000238655 N 0.718
PK25868.1 Cannabis sativa PK25868.1 N 0.718
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.704
29751.m001798 Ricinus communis 29751.m001798 N 0.704
B9HP82_POPTR Populus trichocarpa POPTR_0009s04640 N 0.704
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.704
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.704
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.704
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.704