SB06G018280 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb06g018280 T46018_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb06g018280.1 RRM 103 171
Sb06g018280.1 RRM 196 267
Sb06g018280.1 RRM 297 361

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os04g37690 Oryza sativa LOC_Os04g37690 N 0.951
BRADI5G11810 Brachypodium distachyon BRADI5G11810 N 0.917
SB04G023540 Sorghum bicolor Sb04g023540 N 0.917
GRMZM2G069678 Zea mays GRMZM2G069678 N 0.898
BRADI3G46470 Brachypodium distachyon BRADI3G46470 N 0.893
BGIOSIBCE007488 Oryza indica BGIOSIBCE007488 N 0.850
LOC_Os02g35950 Oryza sativa LOC_Os02g35950 N 0.850
BRADI4G32380 Brachypodium distachyon BRADI4G32380 N 0.783
LOC_Os09g28810 Oryza sativa LOC_Os09g28810 I 0.783
Sb02g026820 Sorghum bicolor Sb02g026820 I 0.778
GRMZM2G467907 Zea mays GRMZM2G467907 I 0.768
GRMZM2G168163 Zea mays GRMZM2G168163 I 0.768
chr5.CM0089.1140.nc Lotus japonicus chr5.CM0089.1140.nc I 0.718
ppa005903m Prunus persica ppa005903m I 0.715
PK00840.1 Cannabis sativa PK00840.1 I 0.712
Cucsa.123510 Cucumis sativus Cucsa.123510 I 0.707
Glyma14g08840.1 Glycine max Glyma14g08840.1 I 0.705
Glyma17g36330.1 Glycine max Glyma17g36330.1 I 0.700
MDP0000136330 Malus x domestica MDP0000136330 I 0.700
MDP0000200455 Malus x domestica MDP0000200455 I 0.700
B9MVK8_POPTR Populus trichocarpa POPTR_0014s03390 I 0.700