Glyma14g09300.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma14g09300.1 T52845_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma14g09300.1 RRM 35 105
Glyma14g09300.1 RRM 123 192
Glyma14g09300.1 RRM 214 283
Glyma14g09300.1 RRM 317 386

Links

Other RRM family RBPs
Other Glycine max RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.950
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.851
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.851
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.843
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.843
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.840
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.840
30170.m013847 Ricinus communis 30170.m013847 N 0.836
ppa002618m Prunus persica ppa002618m N 0.836
ppa002620m Prunus persica ppa002620m N 0.836
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.829
ppa002607m Prunus persica ppa002607m N 0.829
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.822
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.822
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.819
29801.m003152 Ricinus communis 29801.m003152 N 0.819
mgf009542m Mimulus guttatus mgf009542m N 0.819
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.808
mgf004973m Mimulus guttatus mgf004973m N 0.804
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.804
MDP0000497543 Malus x domestica MDP0000497543 N 0.804
MDP0000283985 Malus x domestica MDP0000283985 N 0.804
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.804
PK02172.1 Cannabis sativa PK02172.1 N 0.801
MDP0000156895 Malus x domestica MDP0000156895 N 0.797
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.797
MDP0000253709 Malus x domestica MDP0000253709 N 0.797
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.794
Glyma06g04460.1 Glycine max Glyma06g04460.1 N 0.786
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.783
Glyma04g04300.1 Glycine max Glyma04g04300.1 N 0.772
mgf005294m Mimulus guttatus mgf005294m N 0.762
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.754
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.754
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.754
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.752
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.752
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.747
XM_002891485.1 Arabidopsis lyrata scaffold_104684.1 N 0.747
GRMZM2G352129 Zea mays GRMZM2G352129 N 0.744
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.740
SB06G021850 Sorghum bicolor Sb06g021850 N 0.740
BGIOSIBCE015822 Oryza indica BGIOSIBCE015822 N 0.740
LjSGA_012037.1 Lotus japonicus LjSGA_012037.1 N 0.740
GRMZM2G013619 Zea mays GRMZM2G013619 N 0.740
PAB8 Arabidopsis thaliana AT1G49760-TAIR-G N 0.740
XM_002869128.1 Arabidopsis lyrata Al_scaffold_0007_654 N 0.740
LOC_Os04g42600 Oryza sativa LOC_Os04g42600 N 0.740
BRADI5G14980 Brachypodium distachyon BRADI5G14980 N 0.737
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.737
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.737
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.733
PAB2 Arabidopsis thaliana AT4G34110-TAIR-G N 0.730
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.730
PK00659.1 Cannabis sativa PK00659.1 N 0.726
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.726
GRMZM2G102829 Zea mays GRMZM2G102829 N 0.726
BRADI3G20460 Brachypodium distachyon BRADI3G20460 N 0.723
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.719
mgf004596m Mimulus guttatus mgf004596m N 0.719
BRADI4G08430 Brachypodium distachyon BRADI4G08430 N 0.715
MDP0000286821 Malus x domestica MDP0000286821 N 0.712
28644.m000904 Ricinus communis 28644.m000904 N 0.712
MDP0000212007 Malus x domestica MDP0000212007 N 0.708
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.708
XM_002878634.1 Arabidopsis lyrata scaffold_400317.1 N 0.705
PAB4 Arabidopsis thaliana AT2G23350-TAIR-G N 0.705