e_gw1.23.771.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.23.771.1 T49881_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
gw1.219.6.1_CONSTRUCT
M199_0.6 		RNAcompete CONSTRUCTS UGUUUUD RNAcompete
Ray et al.(2013)
RNCMPT00229 		0.740
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.23.771.1 RRM 23 93
e_gw1.23.771.1 RRM 116 187
e_gw1.23.771.1 RRM 223 287

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.339.2.1 Physcomitrella patens gw1.339.2.1 I 0.740
gw1.219.6.1 Physcomitrella patens gw1.219.6.1 I 0.740
estExt_Genewise1.C_3910068 Physcomitrella patens estExt_Genewise1.C_3910068 I 0.736
LOC_Os09g28810 Oryza sativa LOC_Os09g28810 I 0.707
29801.m003218 Ricinus communis 29801.m003218 I 0.707
BRADI4G32380 Brachypodium distachyon BRADI4G32380 N 0.707
Sb02g026820 Sorghum bicolor Sb02g026820 I 0.707
chr4.CM0079.170.nc Lotus japonicus chr4.CM0079.170.nc I 0.707
Glyma02g15190.1 Glycine max Glyma02g15190.1 I 0.707
Glyma07g33300.1 Glycine max Glyma07g33300.1 I 0.707
Cucsa.301810 Cucumis sativus Cucsa.301810 I 0.702
GRMZM2G467907 Zea mays GRMZM2G467907 I 0.702
PK15272.1 Cannabis sativa PK15272.1 I 0.702