Pa_2_12560 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_2_12560 T57918_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_2_12560 RRM 16 84
Pa_2_12560 RRM 100 168

Links

Other RRM family RBPs
Other Podospora anserina RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_10265 Neurospora tetrasperma estExt_fgenesh1_pg.C_10265 N 0.993
estExt_fgenesh3_pm.C_10926 Neurospora discreta estExt_fgenesh3_pm.C_10926 N 0.993
NCU12158 Neurospora crassa NCU12158 N 0.993
gw1.3.2310.1 Myceliophthora thermophila gw1.3.2310.1 N 0.986
estExt_Genewise1.C_23240 Thielavia terrestris estExt_Genewise1.C_23240 N 0.978
CHGG_07099 Chaetomium globosum CHGG_07099 N 0.957
GLRG_03331 Colletotrichum graminicola GLRG_03331 N 0.920
estExt_GeneWisePlus.C_210250 Trichoderma reesei estExt_GeneWisePlus.C_210250 N 0.913
estExt_Genewise1Plus.C_70091 Cryphonectria parasitica estExt_Genewise1Plus.C_70091 N 0.913
MGG_06881 Magnaporthe oryzae MGG_06881 N 0.913
FVEG_02942 Fusarium verticillioides FVEG_02942 N 0.906
FOXG_05191 Fusarium oxysporum FOXG_05191 N 0.906
estExt_fgenesh1_pg.C_40107 Trichoderma atroviride estExt_fgenesh1_pg.C_40107 N 0.906
VDBG_00519 Verticillium albo atrum VDBG_00519 N 0.899
e_gw1.5.1166.1 Nectria haematococca e_gw1.5.1166.1 N 0.899
estExt_Genewise1Plus.C_230018 Trichoderma virens estExt_Genewise1Plus.C_230018 N 0.899
FGSG_13728 Fusarium graminearum FGSG_13728 N 0.899
An02g14690 Aspergillus niger CADANGAG00002994 N 0.855
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.855
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.855
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.855
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.855
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.848
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.848
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.841
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.841
SS1G_05220 Sclerotinia sclerotiorum SS1G_05220 N 0.841
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.841
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.833
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.827
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.826
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.826
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.819
MCYG_04652 Microsporum canis MCYG_04652 N 0.812
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.812
TERG_03265 Trichophyton rubrum TERG_03265 N 0.812
AFUA_2G06090 Aspergillus fumigatus CADAFUAG00003703 N 0.812
NFIA_082870 Neosartorya fischeri CADNFIAG00006872 N 0.804
ACLA_068230 Aspergillus clavatus CADACLAG00007015 N 0.797
TEQG_02438 Trichophyton equinum TEQG_02438 N 0.797
estExt_Genewise1Plus.C_240153 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_240153 N 0.790
AB01113.1 Alternaria brassicicola AB01113.1 N 0.783
TRV_06675 Trichophyton verrucosum TRV_06675 N 0.775
SJAG_03853 Schizosaccharomyces japonicus SJAG_03853 N 0.755
SPBC660.15 Schizosaccharomyces pombe SPBC660.15 N 0.748
SPOG_01457 Schizosaccharomyces cryophilus SPOG_01457 N 0.748
SOCG_02545 Schizosaccharomyces octosporus SOCG_02545 N 0.741
gw1.6.1353.1 Mycosphaerella graminicola gw1.6.1353.1 N 0.741
estExt_Genewise1Plus.C_500038 Mycosphaerella fijiensis estExt_Genewise1Plus.C_500038 N 0.721
EAT82933.2 Phaeosphaeria nodorum EAT82933.2 N 0.703