AB01113.1 (Alternaria brassicicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AB01113.1 T55385_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AB01113.1 RRM 109 177
AB01113.1 RRM 193 260

Links

Other RRM family RBPs
Other Alternaria brassicicola RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_240153 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_240153 N 0.978
EAT82933.2 Phaeosphaeria nodorum EAT82933.2 N 0.855
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.848
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.841
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.841
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.839
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.833
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.826
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.826
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.826
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.826
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.826
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.826
An02g14690 Aspergillus niger CADANGAG00002994 N 0.819
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.806
CHGG_07099 Chaetomium globosum CHGG_07099 N 0.804
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.803
TERG_03265 Trichophyton rubrum TERG_03265 N 0.803
MCYG_04652 Microsporum canis MCYG_04652 N 0.803
SS1G_05220 Sclerotinia sclerotiorum SS1G_05220 N 0.797
MGG_06881 Magnaporthe oryzae MGG_06881 N 0.797
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.797
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.797
estExt_Genewise1Plus.C_70091 Cryphonectria parasitica estExt_Genewise1Plus.C_70091 N 0.790
estExt_Genewise1.C_23240 Thielavia terrestris estExt_Genewise1.C_23240 N 0.790
gw1.3.2310.1 Myceliophthora thermophila gw1.3.2310.1 N 0.790
estExt_fgenesh3_pm.C_10926 Neurospora discreta estExt_fgenesh3_pm.C_10926 N 0.790
estExt_fgenesh1_pg.C_10265 Neurospora tetrasperma estExt_fgenesh1_pg.C_10265 N 0.790
NCU12158 Neurospora crassa NCU12158 N 0.790
NFIA_082870 Neosartorya fischeri CADNFIAG00006872 N 0.788
TEQG_02438 Trichophyton equinum TEQG_02438 N 0.788
ACLA_068230 Aspergillus clavatus CADACLAG00007015 N 0.788
Pa_2_12560 Podospora anserina Pa_2_12560 N 0.783
AFUA_2G06090 Aspergillus fumigatus CADAFUAG00003703 N 0.781
FVEG_02942 Fusarium verticillioides FVEG_02942 N 0.775
FOXG_05191 Fusarium oxysporum FOXG_05191 N 0.775
GLRG_03331 Colletotrichum graminicola GLRG_03331 N 0.775
estExt_GeneWisePlus.C_210250 Trichoderma reesei estExt_GeneWisePlus.C_210250 N 0.768
FGSG_13728 Fusarium graminearum FGSG_13728 N 0.768
TRV_06675 Trichophyton verrucosum TRV_06675 N 0.766
estExt_fgenesh1_pg.C_40107 Trichoderma atroviride estExt_fgenesh1_pg.C_40107 N 0.761
e_gw1.5.1166.1 Nectria haematococca e_gw1.5.1166.1 N 0.761
VDBG_00519 Verticillium albo atrum VDBG_00519 N 0.761
estExt_Genewise1Plus.C_500038 Mycosphaerella fijiensis estExt_Genewise1Plus.C_500038 N 0.755
estExt_Genewise1Plus.C_230018 Trichoderma virens estExt_Genewise1Plus.C_230018 N 0.754
gw1.6.1353.1 Mycosphaerella graminicola gw1.6.1353.1 N 0.746
PTRG_11443 Pyrenophora tritici repentis PTRG_11443 N 0.745
SNOG_09668 Stagonospora nodorum SNOG_09668 N 0.732
SJAG_03853 Schizosaccharomyces japonicus SJAG_03853 N 0.727
SPOG_01457 Schizosaccharomyces cryophilus SPOG_01457 N 0.719
SPBC660.15 Schizosaccharomyces pombe SPBC660.15 N 0.719
SOCG_02545 Schizosaccharomyces octosporus SOCG_02545 N 0.712