AB09303.1 (Alternaria brassicicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AB09303.1 T55434_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AB09303.1 RRM 161 231

Links

Other RRM family RBPs
Other Alternaria brassicicola RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 1.000
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.986
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.944
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.944
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.901
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.901
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.901
An16g01800 Aspergillus niger CADANGAG00012651 N 0.901
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.901
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.901
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.901
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.901
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.901
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.887
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.887
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.887
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.887
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.873
MCYG_02010 Microsporum canis MCYG_02010 N 0.873
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.873
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.873
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.873
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.873
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.873
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.873
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.873
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.873
TERG_04408 Trichophyton rubrum TERG_04408 N 0.873
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.873
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.873
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.859
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.831
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.761
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.746
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.746
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.746
PIN4 Candida albicans orf19.2534 N 0.746
PIN4 Saccharomyces cerevisiae YBL051C N 0.732
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.732
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.732
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.732
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.732
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.732
CTRG_00938 Candida tropicalis CTRG_00938 N 0.732
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.732
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.732
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.732
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.732
FVEG_09726 Fusarium verticillioides FVEG_09726 N 0.732
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.732
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.718
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.718
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.718
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.718
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.718
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.718
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.718
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.718
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.704
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.704
MGG_06218 Magnaporthe oryzae MGG_06218 N 0.704
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.704
ACR235W Ashbya gossypii ACR235W N 0.704
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.704
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.704
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.704
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.704