XP_002491986.1 (Pichia pastoris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_002491986.1 T59178_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002491986.1 RRM 138 208

Links

Other RRM family RBPs
Other Pichia pastoris RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CTRG_00938 Candida tropicalis CTRG_00938 N 0.901
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.901
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.901
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.901
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.887
PIN4 Candida albicans orf19.2534 N 0.887
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.887
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.887
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.873
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.859
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.845
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.845
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.845
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.831
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.831
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.831
ACR235W Ashbya gossypii ACR235W N 0.817
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.761
PIN4 Saccharomyces cerevisiae YBL051C N 0.746
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.746
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.746
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.746
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.746
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.746
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.746
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.746
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.746
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.746
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.746
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.746
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.746
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.746
An16g01800 Aspergillus niger CADANGAG00012651 N 0.746
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.746
MCYG_02010 Microsporum canis MCYG_02010 N 0.746
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.746
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.746
TERG_04408 Trichophyton rubrum TERG_04408 N 0.746
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.746
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.746
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.746
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.746
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.732
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.732
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.732
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.732
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.732
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.732
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.732
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.732
AB09303.1 Alternaria brassicicola AB09303.1 N 0.718
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.718
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.718
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.718
CAGL0I05082g Candida glabrata CAGL0I05082g N 0.718
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.704
cip2 Schizosaccharomyces pombe SPAC12G12.03 N 0.704
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.704
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.704