estExt_fgenesh1_pg.C_chr_80368 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_chr_80368 T50670_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_80368 RRM 295 365

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.930
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.873
AB09303.1 Alternaria brassicicola AB09303.1 N 0.873
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.873
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.859
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.845
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.845
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.845
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.845
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.831
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.831
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.831
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.831
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.817
TERG_04408 Trichophyton rubrum TERG_04408 N 0.817
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.817
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.817
MCYG_02010 Microsporum canis MCYG_02010 N 0.817
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.817
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.817
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.817
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.817
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.817
An16g01800 Aspergillus niger CADANGAG00012651 N 0.817
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.817
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.817
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.817
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.817
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.817
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.817
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.817
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.803
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.775
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.761
PIN4 Candida albicans orf19.2534 N 0.761
PIN4 Saccharomyces cerevisiae YBL051C N 0.761
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.761
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.761
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.761
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.746
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.746
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.746
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.746
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.746
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.746
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.746
CTRG_00938 Candida tropicalis CTRG_00938 N 0.746
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.746
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.732
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.732
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.732
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.732
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.732
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.732
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.732
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.718
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.718
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.718
VDBG_05689 Verticillium albo atrum VDBG_05689 N 0.704
VDAG_07628 Verticillium dahliae VDAG_07628 N 0.704
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.704
ACR235W Ashbya gossypii ACR235W N 0.704