MDP0000123414 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000123414 T57307_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000123414 RRM 109 156
MDP0000123414 RRM 179 250
MDP0000123414 RRM 298 362

Links

Other RRM family RBPs
Other Malus x domestica RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000123012 Malus x domestica MDP0000123012 N 0.952
MDP0000276227 Malus x domestica MDP0000276227 I 0.885
ppa005940m Prunus persica ppa005940m I 0.808
Cucsa.301810 Cucumis sativus Cucsa.301810 I 0.793
PK28027.1 Cannabis sativa PK28027.1 I 0.774
GSVIVG00025280001 Vitis vinifera GSVIVG00025280001 I 0.769
cassava2135.valid.m1 Manihot esculenta cassava2135.valid.m1 I 0.764
30169.m006434 Ricinus communis 30169.m006434 I 0.750
Medtr2g117480 Medicago truncatula Medtr2g117480 I 0.740
Glyma13g41500.1 Glycine max Glyma13g41500.1 I 0.740
B9HNV7_POPTR Populus trichocarpa POPTR_0009s05920 I 0.736
mgf023806m Mimulus guttatus mgf023806m I 0.716
SB01G045570 Sorghum bicolor Sb01g045570 I 0.707
Glyma11g14150.1 Glycine max Glyma11g14150.1 N 0.707
GRMZM2G142557 Zea mays GRMZM2G142557 I 0.702