PMAA_072470 (Penicillium marneffei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PMAA_072470 T58296_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CADANIAG00004740
M241_0.6 		Aspergillus nidulans UACUAMK RNAcompete
Ray et al.(2013)
RNCMPT00287 		0.887
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_072470.t1 RRM 241 311

Links

Other RRM family RBPs
Other Penicillium marneffei RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TEQG_04534 Trichophyton equinum TEQG_04534 I 0.901
ARB_07912 Arthroderma benhamiae ARB_07912 I 0.901
TERG_02769 Trichophyton rubrum TERG_02769 I 0.901
TESG_08545 Trichophyton tonsurans TESG_08545 I 0.901
TRV_04123 Trichophyton verrucosum TRV_04123 I 0.901
CADANIAG00004740 Aspergillus nidulans CADANIAG00004740 D 0.887
An11g02050 Aspergillus niger CADANGAG00008541 I 0.887
PABG_01757 Paracoccidioides brasiliensis PABG_01757 I 0.887
MCYG_08625 Microsporum canis MCYG_08625 I 0.887
AFLA_036830 Aspergillus flavus CADAFLAG00003057 I 0.873
CPSG_02060 Coccidioides posadasii CPSG_02060 I 0.873
CIMG_01152 Coccidioides immitis CIMG_01152 I 0.873
HCAG_05883 Histoplasma capsulatum HCAG_05883 I 0.873
fgenesh1_pm.00118_#_519 Aspergillus carbonarius fgenesh1_pm.00118_#_519 I 0.873
AO090003000122 Aspergillus oryzae CADAORAG00000798 I 0.873
ATEG_05852 Aspergillus terreus CADATEAG00002953 I 0.873
UREG_01087 Uncinocarpus reesii UREG_01087 I 0.873
BDBG_03382 Blastomyces dermatitidis BDBG_03382 I 0.873
AFUA_6G08040 Aspergillus fumigatus CADAFUAG00002290 I 0.859
NFIA_053730 Neosartorya fischeri CADNFIAG00004585 I 0.859
GSTUMT00010522001 Tuber melanosporum GSTUMT00010522001 I 0.845
ACLA_082600 Aspergillus clavatus CADACLAG00007506 I 0.845
SS1G_09871 Sclerotinia sclerotiorum SS1G_09871 I 0.803
BC1G_02746 Botrytis cinerea BC1G_02746 I 0.803
Pc12g10950 Penicillium chrysogenum Pc12g10950 I 0.789
AB09441.1 Alternaria brassicicola AB09441.1 I 0.761
PTRG_02274 Pyrenophora tritici repentis PTRG_02274 I 0.761
EAT76715.1 Phaeosphaeria nodorum EAT76715.1 I 0.746
SNOG_15877 Stagonospora nodorum SNOG_15877 I 0.746
fgenesh1_pg.sca_1_chr1_3_0000264 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000264 I 0.732
FGSG_11902 Fusarium graminearum FGSG_11902 I 0.732
estExt_Genewise1.C_320079 Cochliobolus heterostrophus C5 estExt_Genewise1.C_320079 I 0.732
FVEG_01237 Fusarium verticillioides FVEG_01237 I 0.732
GLRG_01583 Colletotrichum graminicola GLRG_01583 I 0.732
e_gw1.1.2591.1 Trichoderma atroviride e_gw1.1.2591.1 I 0.732
FOXG_00280 Fusarium oxysporum FOXG_00280 I 0.732
e_gw1.3.1071.1 Trichoderma reesei e_gw1.3.1071.1 I 0.732
gw1.6.1720.1 Cryphonectria parasitica gw1.6.1720.1 I 0.718
gw1.33.170.1 Trichoderma virens gw1.33.170.1 I 0.718
Pa_1_11770 Podospora anserina Pa_1_11770 I 0.704
MGG_01274 Magnaporthe oryzae MGG_01274 I 0.704
estExt_Genewise1Plus.C_13260 Thielavia terrestris estExt_Genewise1Plus.C_13260 I 0.704
estExt_fgenesh1_pg.C_20919 Myceliophthora thermophila estExt_fgenesh1_pg.C_20919 I 0.704