SNOG_15877 (Stagonospora nodorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SNOG_15877 T30645_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CADANIAG00004740
M241_0.6 		Aspergillus nidulans UACUAMK RNAcompete
Ray et al.(2013)
RNCMPT00287 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
SNOT_15877 RRM 189 259

Links

Other RRM family RBPs
Other Stagonospora nodorum RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EAT76715.1 Phaeosphaeria nodorum EAT76715.1 I 1.000
AB09441.1 Alternaria brassicicola AB09441.1 I 0.915
estExt_Genewise1.C_320079 Cochliobolus heterostrophus C5 estExt_Genewise1.C_320079 I 0.915
PTRG_02274 Pyrenophora tritici repentis PTRG_02274 I 0.915
UREG_01087 Uncinocarpus reesii UREG_01087 I 0.817
GSTUMT00010522001 Tuber melanosporum GSTUMT00010522001 I 0.803
BDBG_03382 Blastomyces dermatitidis BDBG_03382 I 0.789
ARB_07912 Arthroderma benhamiae ARB_07912 I 0.789
CPSG_02060 Coccidioides posadasii CPSG_02060 I 0.789
CIMG_01152 Coccidioides immitis CIMG_01152 I 0.789
HCAG_05883 Histoplasma capsulatum HCAG_05883 I 0.789
PABG_01757 Paracoccidioides brasiliensis PABG_01757 I 0.789
TRV_04123 Trichophyton verrucosum TRV_04123 I 0.789
TESG_08545 Trichophyton tonsurans TESG_08545 I 0.789
TEQG_04534 Trichophyton equinum TEQG_04534 I 0.789
TERG_02769 Trichophyton rubrum TERG_02769 I 0.789
An11g02050 Aspergillus niger CADANGAG00008541 I 0.775
CADANIAG00004740 Aspergillus nidulans CADANIAG00004740 D 0.775
MCYG_08625 Microsporum canis MCYG_08625 I 0.775
fgenesh1_pm.00118_#_519 Aspergillus carbonarius fgenesh1_pm.00118_#_519 I 0.761
AO090003000122 Aspergillus oryzae CADAORAG00000798 I 0.761
ATEG_05852 Aspergillus terreus CADATEAG00002953 I 0.761
AFLA_036830 Aspergillus flavus CADAFLAG00003057 I 0.761
BC1G_02746 Botrytis cinerea BC1G_02746 I 0.746
SS1G_09871 Sclerotinia sclerotiorum SS1G_09871 I 0.746
PMAA_072470 Penicillium marneffei PMAA_072470 I 0.746
Pc12g10950 Penicillium chrysogenum Pc12g10950 I 0.732
Pa_1_11770 Podospora anserina Pa_1_11770 I 0.732
AFUA_6G08040 Aspergillus fumigatus CADAFUAG00002290 I 0.732
NFIA_053730 Neosartorya fischeri CADNFIAG00004585 I 0.732
FGSG_11902 Fusarium graminearum FGSG_11902 I 0.718
GLRG_01583 Colletotrichum graminicola GLRG_01583 I 0.718
FVEG_01237 Fusarium verticillioides FVEG_01237 I 0.718
FOXG_00280 Fusarium oxysporum FOXG_00280 I 0.718
fgenesh1_pg.sca_1_chr1_3_0000264 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000264 I 0.718
ACLA_082600 Aspergillus clavatus CADACLAG00007506 I 0.718
VDAG_04412 Verticillium dahliae VDAG_04412 I 0.718
e_gw1.1.2591.1 Trichoderma atroviride e_gw1.1.2591.1 I 0.718
e_gw1.3.1071.1 Trichoderma reesei e_gw1.3.1071.1 I 0.718
gw1.33.170.1 Trichoderma virens gw1.33.170.1 I 0.704
estExt_Genewise1Plus.C_50687 Neurospora tetrasperma estExt_Genewise1Plus.C_50687 I 0.704
NCU03099 Neurospora crassa NCU03099 I 0.704
estExt_fgenesh3_kg.C_70295 Neurospora discreta estExt_fgenesh3_kg.C_70295 I 0.704
gw1.6.1720.1 Cryphonectria parasitica gw1.6.1720.1 I 0.704