An11g02050 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00008541 T33563_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CADANIAG00004740
M241_0.6 		Aspergillus nidulans UACUAMK RNAcompete
Ray et al.(2013)
RNCMPT00287 		0.986
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00008391 RRM 108 178

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CADANIAG00004740 Aspergillus nidulans CADANIAG00004740 D 0.986
fgenesh1_pm.00118_#_519 Aspergillus carbonarius fgenesh1_pm.00118_#_519 I 0.986
AFLA_036830 Aspergillus flavus CADAFLAG00003057 I 0.986
AO090003000122 Aspergillus oryzae CADAORAG00000798 I 0.986
TEQG_04534 Trichophyton equinum TEQG_04534 I 0.958
TRV_04123 Trichophyton verrucosum TRV_04123 I 0.958
TESG_08545 Trichophyton tonsurans TESG_08545 I 0.958
TERG_02769 Trichophyton rubrum TERG_02769 I 0.958
ARB_07912 Arthroderma benhamiae ARB_07912 I 0.958
ATEG_05852 Aspergillus terreus CADATEAG00002953 I 0.958
MCYG_08625 Microsporum canis MCYG_08625 I 0.944
PABG_01757 Paracoccidioides brasiliensis PABG_01757 I 0.944
CIMG_01152 Coccidioides immitis CIMG_01152 I 0.930
HCAG_05883 Histoplasma capsulatum HCAG_05883 I 0.930
NFIA_053730 Neosartorya fischeri CADNFIAG00004585 I 0.930
AFUA_6G08040 Aspergillus fumigatus CADAFUAG00002290 I 0.930
UREG_01087 Uncinocarpus reesii UREG_01087 I 0.930
BDBG_03382 Blastomyces dermatitidis BDBG_03382 I 0.930
CPSG_02060 Coccidioides posadasii CPSG_02060 I 0.930
GSTUMT00010522001 Tuber melanosporum GSTUMT00010522001 I 0.915
ACLA_082600 Aspergillus clavatus CADACLAG00007506 I 0.915
PMAA_072470 Penicillium marneffei PMAA_072470 I 0.887
BC1G_02746 Botrytis cinerea BC1G_02746 I 0.873
SS1G_09871 Sclerotinia sclerotiorum SS1G_09871 I 0.859
e_gw1.3.1071.1 Trichoderma reesei e_gw1.3.1071.1 I 0.817
FGSG_11902 Fusarium graminearum FGSG_11902 I 0.817
GLRG_01583 Colletotrichum graminicola GLRG_01583 I 0.817
fgenesh1_pg.sca_1_chr1_3_0000264 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000264 I 0.817
Pc12g10950 Penicillium chrysogenum Pc12g10950 I 0.817
e_gw1.1.2591.1 Trichoderma atroviride e_gw1.1.2591.1 I 0.817
FVEG_01237 Fusarium verticillioides FVEG_01237 I 0.803
gw1.6.1720.1 Cryphonectria parasitica gw1.6.1720.1 I 0.803
gw1.33.170.1 Trichoderma virens gw1.33.170.1 I 0.803
FOXG_00280 Fusarium oxysporum FOXG_00280 I 0.803
PTRG_02274 Pyrenophora tritici repentis PTRG_02274 I 0.789
MGG_01274 Magnaporthe oryzae MGG_01274 I 0.789
estExt_Genewise1.C_320079 Cochliobolus heterostrophus C5 estExt_Genewise1.C_320079 I 0.789
Pa_1_11770 Podospora anserina Pa_1_11770 I 0.789
estExt_fgenesh1_pg.C_20919 Myceliophthora thermophila estExt_fgenesh1_pg.C_20919 I 0.789
estExt_Genewise1Plus.C_13260 Thielavia terrestris estExt_Genewise1Plus.C_13260 I 0.789
AB09441.1 Alternaria brassicicola AB09441.1 I 0.789
EAT76715.1 Phaeosphaeria nodorum EAT76715.1 I 0.775
SNOG_15877 Stagonospora nodorum SNOG_15877 I 0.775
VDAG_04412 Verticillium dahliae VDAG_04412 I 0.761
estExt_fgenesh3_kg.C_70295 Neurospora discreta estExt_fgenesh3_kg.C_70295 I 0.761
estExt_Genewise1Plus.C_50687 Neurospora tetrasperma estExt_Genewise1Plus.C_50687 I 0.761
NCU03099 Neurospora crassa NCU03099 I 0.761
CHGG_00842 Chaetomium globosum CHGG_00842 I 0.746
gw1.8.745.1 Mycosphaerella fijiensis gw1.8.745.1 N 0.732
gw1.6.1506.1 Mycosphaerella graminicola gw1.6.1506.1 N 0.718