emb2726 (Arabidopsis thaliana)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 AT4G29060-TAIR-G T60140_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT4G29060.1-P S1 132 205
AT4G29060.1-P S1 244 318
AT4G29060.2-P S1 132 205
AT4G29060.2-P S1 244 318

Links

Other S1 family RBPs
Other Arabidopsis thaliana RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29912.m005480 Ricinus communis 29912.m005480 N 0.792
B9ILQ4_POPTR Populus trichocarpa POPTR_0018s09080 N 0.792
cassava8220.valid.m1 Manihot esculenta cassava8220.valid.m1 N 0.779
Cucsa.263190 Cucumis sativus Cucsa.263190 N 0.758
mgf012735m Mimulus guttatus mgf012735m N 0.752
cassava29926.valid.m1 Manihot esculenta cassava29926.valid.m1 N 0.745
ppa000765m Prunus persica ppa000765m N 0.745
PDK_20s1481371g001 Phoenix dactylifera PDK_20s1481371g001 N 0.738
MDP0000169133 Malus x domestica MDP0000169133 N 0.732
MDP0000484420 Malus x domestica MDP0000484420 N 0.718
Medtr6g098870 Medicago truncatula Medtr6g098870 N 0.711
PK05605.1 Cannabis sativa PK05605.1 N 0.705
chr2.CM0660.130.nc Lotus japonicus chr2.CM0660.130.nc N 0.705