PDK_20s1481371g001 (Phoenix dactylifera)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 PDK_20s1481371g001 T61649_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1481371g001 S1 143 216
PDK_20s1481371g001 S1 261 333

Links

Other S1 family RBPs
Other Phoenix dactylifera RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9ILQ4_POPTR Populus trichocarpa POPTR_0018s09080 N 0.804
Cucsa.263190 Cucumis sativus Cucsa.263190 N 0.791
cassava8220.valid.m1 Manihot esculenta cassava8220.valid.m1 N 0.784
29912.m005480 Ricinus communis 29912.m005480 N 0.784
ppa000765m Prunus persica ppa000765m N 0.784
cassava29926.valid.m1 Manihot esculenta cassava29926.valid.m1 N 0.764
mgf012735m Mimulus guttatus mgf012735m N 0.764
chr2.CM0660.130.nc Lotus japonicus chr2.CM0660.130.nc N 0.750
MDP0000169133 Malus x domestica MDP0000169133 N 0.750
PK05605.1 Cannabis sativa PK05605.1 N 0.750
emb2726 Arabidopsis thaliana AT4G29060-TAIR-G N 0.738
MDP0000484420 Malus x domestica MDP0000484420 N 0.730
Medtr6g098870 Medicago truncatula Medtr6g098870 N 0.716
Glyma08g04060.1 Glycine max Glyma08g04060.1 N 0.709
Glyma09g32600.1 Glycine max Glyma09g32600.1 N 0.703