Medtr6g098870 (Medicago truncatula)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Medtr6g098870 T61390_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr6g098870.1 S1 142 214
Medtr6g098870.1 S1 251 324

Links

Other S1 family RBPs
Other Medicago truncatula RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
chr2.CM0660.130.nc Lotus japonicus chr2.CM0660.130.nc N 0.837
B9ILQ4_POPTR Populus trichocarpa POPTR_0018s09080 N 0.789
29912.m005480 Ricinus communis 29912.m005480 N 0.784
Glyma09g32600.1 Glycine max Glyma09g32600.1 N 0.776
cassava8220.valid.m1 Manihot esculenta cassava8220.valid.m1 N 0.770
Cucsa.263190 Cucumis sativus Cucsa.263190 N 0.770
Glyma01g34700.1 Glycine max Glyma01g34700.1 N 0.770
mgf012735m Mimulus guttatus mgf012735m N 0.757
PK05605.1 Cannabis sativa PK05605.1 N 0.757
cassava29926.valid.m1 Manihot esculenta cassava29926.valid.m1 N 0.736
ppa000765m Prunus persica ppa000765m N 0.730
Glyma08g04060.1 Glycine max Glyma08g04060.1 N 0.723
PDK_20s1481371g001 Phoenix dactylifera PDK_20s1481371g001 N 0.716
emb2726 Arabidopsis thaliana AT4G29060-TAIR-G N 0.711
MDP0000169133 Malus x domestica MDP0000169133 N 0.703