chr2.CM0660.130.nc (Lotus japonicus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 chr2.CM0660.130.nc T61482_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0660.130.nc S1 142 214
chr2.CM0660.130.nc S1 255 328

Links

Other S1 family RBPs
Other Lotus japonicus RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma09g32600.1 Glycine max Glyma09g32600.1 N 0.864
Glyma01g34700.1 Glycine max Glyma01g34700.1 N 0.851
Medtr6g098870 Medicago truncatula Medtr6g098870 N 0.837
B9ILQ4_POPTR Populus trichocarpa POPTR_0018s09080 N 0.823
Cucsa.263190 Cucumis sativus Cucsa.263190 N 0.818
ppa000765m Prunus persica ppa000765m N 0.804
MDP0000169133 Malus x domestica MDP0000169133 N 0.804
PK05605.1 Cannabis sativa PK05605.1 N 0.797
cassava8220.valid.m1 Manihot esculenta cassava8220.valid.m1 N 0.797
29912.m005480 Ricinus communis 29912.m005480 N 0.791
MDP0000484420 Malus x domestica MDP0000484420 N 0.791
Glyma08g04060.1 Glycine max Glyma08g04060.1 N 0.784
mgf012735m Mimulus guttatus mgf012735m N 0.770
cassava29926.valid.m1 Manihot esculenta cassava29926.valid.m1 N 0.764
PDK_20s1481371g001 Phoenix dactylifera PDK_20s1481371g001 N 0.750
emb2726 Arabidopsis thaliana AT4G29060-TAIR-G N 0.705