RBM28 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSEEUG00000002389 T079686_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
RBM28
M10443_2.00		 Erinaceus europaeus NGWGUAGW JPLE
Sasse et al.(2025)
RM_Eri.eur_ENSEEUG00000002389 		0.015

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.015
(90.51%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000002189 RRM 2 82
ENSEEUP00000002189 RRM 111 193
ENSEEUP00000002189 RRM 374 424
ENSEEUP00000002189 RRM 488 578

RNA contacting residues

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.759
RBM28 Tupaia belangeri ENSTBEG00000012749 I 0.752
RBM28 Procavia capensis ENSPCAG00000008223 I 0.749
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.734
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.732
RBM28 Equus caballus ENSECAG00000007745 I 0.731
ENSMPUG00000006511 Mustela putorius furo ENSMPUG00000006511 I 0.731
RBM28 Felis catus ENSFCAG00000000946 I 0.729
RBM28 Homo sapiens ENSG00000106344 D 0.728
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.728
ENSPPYG00000017975 Pongo abelii ENSPPYG00000017975 I 0.728
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.728
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.728
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.725
RBM28 Canis familiaris ENSCAFG00000001667 I 0.723
ENSNLEG00000012307 Nomascus leucogenys ENSNLEG00000012307 I 0.722
RBM28 Echinops telfairi ENSETEG00000007130 I 0.720
ENSPANG00000022295 Papio anubis ENSPANG00000022295 I 0.720
ENSAMEG00000004776 Ailuropoda melanoleuca ENSAMEG00000004776 I 0.720
ENSCSAG00000010161 Chlorocebus sabaeus ENSCSAG00000010161 I 0.720
ENSSTOG00000002169 Ictidomys tridecemlineatus ENSSTOG00000002169 I 0.719
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.715
Rbm28 Mus musculus ENSMUSG00000029701 I 0.709
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.702