ENSPPYG00000017975 (Pongo abelii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSPPYG00000017975 T086246_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSPPYG00000017975
M22590_2.00		 Pongo abelii NGWGUAGW JPLE
Sasse et al.(2025)
RM_Pon.abe_ENSPPYG00000017975 		0.005

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M00630_2.00 		Homo sapiens GUGGGUCUCGK HTR-SELEX
Jolma et al.(2020)
0.997
RBM28
M00629_2.00 		Homo sapiens KRGGYYGWGCGGUGG HTR-SELEX
Jolma et al.(2020)
0.997
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
0.997
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.005
(87.78%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000020164 RRM 3 82
ENSPPYP00000020164 RRM 111 193
ENSPPYP00000020164 RRM 330 419
ENSPPYP00000020164 RRM 483 573

RNA contacting residues

Links

Other RRM family RBPs
Other Pongo abelii RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.997
RBM28 Homo sapiens ENSG00000106344 D 0.997
ENSNLEG00000012307 Nomascus leucogenys ENSNLEG00000012307 I 0.991
ENSCSAG00000010161 Chlorocebus sabaeus ENSCSAG00000010161 I 0.980
ENSPANG00000022295 Papio anubis ENSPANG00000022295 I 0.974
ENSP00000223073 Macaca fascicularis ENSP00000223073 I 0.946
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.937
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.936
ENSMPUG00000006511 Mustela putorius furo ENSMPUG00000006511 I 0.936
RBM28 Equus caballus ENSECAG00000007745 I 0.934
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.931
ENSSTOG00000002169 Ictidomys tridecemlineatus ENSSTOG00000002169 I 0.928
ENSAMEG00000004776 Ailuropoda melanoleuca ENSAMEG00000004776 I 0.928
RBM28 Canis familiaris ENSCAFG00000001667 I 0.928
RBM28 Felis catus ENSFCAG00000000946 I 0.928
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.928
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.925
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.924
Rbm28 Mus musculus ENSMUSG00000029701 I 0.905
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.905
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.902
Myotis_brandtii_RBM28_10012817 Myotis brandtii Myotis_brandtii_RBM28_10012817 I 0.895
ENSOARG00000002547 Ovis aries ENSOARG00000002547 I 0.883
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.882
RBM28 Bos taurus ENSBTAG00000017001 I 0.875
ENSP00000223073-D1 Bos grunniens ENSP00000223073-D1 I 0.872
RBM28 Echinops telfairi ENSETEG00000007130 I 0.870
RBM28 Microcebus murinus ENSMICG00000000107 I 0.870
RBM28 Sorex araneus ENSSARG00000008303 I 0.863
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.855
ENSTSYG00000002892 Tarsius syrichta ENSTSYG00000002892 I 0.766
ENSSHAG00000017017 Sarcophilus harrisii ENSSHAG00000017017 I 0.764
ENSMEUG00000009611 Macropus eugenii ENSMEUG00000009611 I 0.764
RBM28 Erinaceus europaeus ENSEEUG00000002389 I 0.728
rbm28 Xenopus tropicalis XB-GENE-919947 I 0.719