CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPANG00000022295
(
Papio anubis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRMs_3D)
IPR000504
ENSPANG00000022295
T085529_2.00
Ensembl (2018-Dec-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
JPLE
e-dist
ENSPANG00000022295
M21096_2.00
Papio anubis
NGWGUAGW
JPLE
Sasse et al.(2025)
RM_Pap.anu_ENSPANG00000022295
0.006
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
RBM28
M00630_2.00
Homo sapiens
GUGGGUCUCGK
HTR-SELEX
Jolma et al.(2020)
0.977
RBM28
M00629_2.00
Homo sapiens
KRGGYYGWGCGGUGG
HTR-SELEX
Jolma et al.(2020)
0.977
RBM28
M00069_2.00
Homo sapiens
GWGUAGD
RNAcompete
Ray et al.(2013)
0.977
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
Motifs from training set RBPs that strongly contributed to the reconstructed motif
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
e-dist (%
contribution)
RBM28
M00069_2.00
Homo sapiens
GWGUAGD
RNAcompete
Ray et al.(2013)
RNCMPT00049
0.006
(86.83%)
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPANP00000016642
RRM
2
82
ASLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEITTFEGCKINVTVAKKKL
ENSPANP00000016642
RRM
111
193
DKKARLIIRNLSFKCSEEDLKTVFAQFGAILEVNIPRKPDGKMRGFAFVQFKNLLEAGKALRGMNMKEIKGRTVAVDWAVAKD
ENSPANP00000016642
RRM
335
424
NEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDGRQLKVDLAVTRD
ENSPANP00000016642
RRM
487
578
VSQTRLCLHNLPKAVDDKQLRKLLLSATSGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNPEIFGPLKRPIV
ENSPANP00000016644
RRM
2
82
ASLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEITTFEGCKINVTVAKKKL
ENSPANP00000016644
RRM
111
193
DKKARLIIRNLSFKCSEEDLKTVFAQFGAILEVNIPRKPDGKMRGFAFVQFKNLLEAGKALRGMNMKEIKGRTVAVDWAVAKD
ENSPANP00000016644
RRM
305
394
NEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDGRQLKVDLAVTRD
ENSPANP00000016644
RRM
457
548
VSQTRLCLHNLPKAVDDKQLRKLLLSATSGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNPEIFGPLKRPIV
RNA contacting residues
Links
Other
RRM
family RBPs
Other
Papio anubis
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCSAG00000010161
Chlorocebus sabaeus
ENSCSAG00000010161
I
0.994
RBM28
Pan troglodytes
ENSPTRG00000019659
I
0.977
RBM28
Homo sapiens
ENSG00000106344
D
0.977
ENSPPYG00000017975
Pongo abelii
ENSPPYG00000017975
I
0.974
ENSP00000223073
Macaca fascicularis
ENSP00000223073
I
0.972
ENSNLEG00000012307
Nomascus leucogenys
ENSNLEG00000012307
I
0.971
RBM28
Equus caballus
ENSECAG00000007745
I
0.928
ENSAMEG00000004776
Ailuropoda melanoleuca
ENSAMEG00000004776
I
0.925
RBM28
Canis familiaris
ENSCAFG00000001667
I
0.925
RBM28
Felis catus
ENSFCAG00000000946
I
0.925
ENSMPUG00000006511
Mustela putorius furo
ENSMPUG00000006511
I
0.925
RBM28
Cavia porcellus
ENSCPOG00000006253
I
0.922
RBM28
Loxodonta africana
ENSLAFG00000010717
I
0.922
RBM28
Tursiops truncatus
ENSTTRG00000013647
I
0.920
RBM28
Myotis lucifugus
ENSMLUG00000002186
I
0.919
RBM28
Dasypus novemcinctus
ENSDNOG00000001124
I
0.917
ENSSTOG00000002169
Ictidomys tridecemlineatus
ENSSTOG00000002169
I
0.911
RBM28
Oryctolagus cuniculus
ENSOCUG00000003009
I
0.908
Rbm28
Mus musculus
ENSMUSG00000029701
I
0.900
Rbm28
Rattus norvegicus
ENSRNOG00000005468
I
0.897
RBM28
Callithrix jacchus
ENSCJAG00000017731
I
0.889
Myotis_brandtii_RBM28_10012817
Myotis brandtii
Myotis_brandtii_RBM28_10012817
I
0.882
RBM28
Monodelphis domestica
ENSMODG00000015151
I
0.874
ENSOARG00000002547
Ovis aries
ENSOARG00000002547
I
0.873
ENSP00000223073-D1
Bos grunniens
ENSP00000223073-D1
I
0.867
RBM28
Bos taurus
ENSBTAG00000017001
I
0.864
RBM28
Echinops telfairi
ENSETEG00000007130
I
0.864
RBM28
Microcebus murinus
ENSMICG00000000107
I
0.861
RBM28
Sorex araneus
ENSSARG00000008303
I
0.844
RBM28
Gorilla gorilla
ENSGGOG00000004644
I
0.838
ENSSHAG00000017017
Sarcophilus harrisii
ENSSHAG00000017017
I
0.765
ENSMEUG00000009611
Macropus eugenii
ENSMEUG00000009611
I
0.759
ENSTSYG00000002892
Tarsius syrichta
ENSTSYG00000002892
I
0.756
RBM28
Erinaceus europaeus
ENSEEUG00000002389
I
0.720
rbm28
Xenopus tropicalis
XB-GENE-919947
I
0.717