Bm1_55710 (Brugia malayi)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Bm1_55710 T00259_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Bm1_55710 CCCH ZF 31 57
Bm1_55710 RRM 100 160
Bm1_55710 CCCH ZF 169 194

Links

Other CCCH ZF,RRM family RBPs
Other Brugia malayi RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
0300010273 Ostreococcus tauri 0300010273 I 0.000
AAD24207 Xenopus laevis AAD24207 I 0.000
AAH82435 Xenopus laevis AAH82435 I 0.000
AAI08849 Xenopus laevis AAI08849 I 0.000
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.000
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.000
Aqu1.221345 Amphimedon queenslandica Aqu1.221345 I 0.000
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.000
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.000
CMA121C Cyanidioschyzon merolae CMA121C N 0.000
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.000
EDI_287240 Entamoeba dispar EDI_287240 N 0.000
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.000
EHI_008770 Entamoeba histolytica EHI_008770 N 0.000
ZFP36 Danio rerio ENSDARG00000044395 I 0.000
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.000
Zfp36 Mus musculus ENSMUSG00000044786 I 0.000
Zfp36 Rattus norvegicus ENSRNOG00000019673 I 0.000
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.000
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.000
estExt_fgenesh1_pg.C_3580026 Physcomitrella patens estExt_fgenesh1_pg.C_3580026 N 0.000
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.000
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.000
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.000
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.000
estExt_fgeneshDP_kg.C_230001 Dictyostelium purpureum estExt_fgeneshDP_kg.C_230001 I 0.000
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.000
e_gw1.1.2331.1 Agaricus bisporus e_gw1.1.2331.1 N 0.000
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.000
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.000
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.000
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.000
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.000
gw1.14.301.1 Coccomyxa C 169 gw1.14.301.1 N 0.000
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.000
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.000
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.000
SPPG_04528 Spizellomyces punctatus SPPG_04528 N 0.000
SPRG_05482 Saprolegnia parasitica SPRG_05482 N 0.000
SPRG_14542 Saprolegnia parasitica SPRG_14542 N 0.000
s_442346 Phytophthora sojae s_442346 N 0.000