ENSCHOG00000006973 (Choloepus hoffmanni)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCHOG00000006973 T18495_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		1.000
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		1.000
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.776
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.753
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000006180 KH 156 240

Links

Other KH family RBPs
Other Choloepus hoffmanni RBPs

106 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
184981 Helobdella robusta 184981 N 0.000
AAEL006713 Aedes aegypti AAEL006713 N 0.000
AAI08559 Xenopus laevis AAI08559 N 0.000
AGAP002956 Anopheles gambiae AGAP002956 N 0.000
amel4_ncbi_hmm38272 Apis mellifera amel4_ncbi_hmm38272 N 0.000
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.000
Aqu1.219575 Amphimedon queenslandica Aqu1.219575 N 0.000
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 0.000
CPIJ003901 Culex quinquefasciatus CPIJ003901 N 0.000
CPIJ016711 Culex quinquefasciatus CPIJ016711 N 0.000
CpipJ_CPIJ003901 Culex pipiens CpipJ_CPIJ003901 N 0.000
CpipJ_CPIJ016711 Culex pipiens CpipJ_CPIJ016711 N 0.000
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.000
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.000
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.000
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.000
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.000
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.000
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.000
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.000
u2af1 Danio rerio ENSDARG00000015325 N 0.000
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.000
LOC100057570 Equus caballus ENSECAG00000015558 N 0.000
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.000
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.000
U2AF1 Homo sapiens ENSG00000160201 N 0.000
U2AF1L4 Homo sapiens ENSG00000161265 N 0.000
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.000
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.000
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.000
U2AF1L4 Gorilla gorilla ENSGGOG00000016828 N 0.000
ENSGGOG00000025487 Gorilla gorilla ENSGGOG00000025487 N 0.000
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.000
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.000
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.000
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.000
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.000
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.000
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.000
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.000
U2af1 Mus musculus ENSMUSG00000061613 N 0.000
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.000
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.000
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.000
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.000
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.000
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.000
U2AF1L4 Pan troglodytes ENSPTRG00000010860 N 0.000
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.000
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.000
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.000
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.000
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.000
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.000
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.000
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.000
ENSTNIG00000013914 Tetraodon nigroviridis ENSTNIG00000013914 N 0.000
Q9YHU4_FUGRU Takifugu rubripes ENSTRUG00000010538 N 0.000
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.000
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.000
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.000
estExt_Genewise1.C_3650003 Capitella teleta estExt_Genewise1.C_3650003 N 0.000
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.000
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.000
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.000
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.000
e_gw1.35.104.1 Trichoplax adhaerens e_gw1.35.104.1 N 0.000
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.000
e_gw1.5.355.1 Batrachochytrium dendrobatidis e_gw1.5.355.1 N 0.000
U2af38 Drosophila melanogaster FBgn0017457 N 0.000
GA17536-RA Drosophila pseudoobscura FBgn0077547 N 0.000
GF24893 Drosophila ananassae FBgn0101885 N 0.000
GG24659 Drosophila erecta FBgn0116791 N 0.000
GH10217 Drosophila grimshawi FBgn0117698 N 0.000
GI15018 Drosophila mojavensis FBgn0137768 N 0.000
GL25824 Drosophila persimilis FBgn0163408 N 0.000
GM16679 Drosophila sechellia FBgn0171592 N 0.000
GD22967 Drosophila simulans FBgn0194360 N 0.000
GJ17240 Drosophila virilis FBgn0204416 N 0.000
GK14823 Drosophila willistoni FBgn0216828 N 0.000
GE16227 Drosophila yakuba FBgn0233767 N 0.000
nasonia_NCBI_hmm622923 Nasonia vitripennis nasonia_NCBI_hmm622923 N 0.000
PHUM349680 Pediculus humanus PHUM349680 N 0.000
Sjc_0045900 Schistosoma japonicum Sjc_0045900 N 0.000
Smp_093100 Schistosoma mansoni Smp_093100 N 0.000
SPPG_02695 Spizellomyces punctatus SPPG_02695 N 0.000
XP_001191705.1 Strongylocentrotus purpuratus XP_001191705.1 N 0.000
XP_002156010.1 Hydra magnipapillata XP_002156010.1 N 0.000
XP_002167624.1 Hydra magnipapillata XP_002167624.1 N 0.000