KHDRBS1 (Procavia capensis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPCAG00000009844 T19312_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		1.000
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		1.000
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.776
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.753
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000009179 KH 156 240

Links

Other KH family RBPs
Other Procavia capensis RBPs

106 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
0300010273 Ostreococcus tauri 0300010273 I 0.000
AAD24207 Xenopus laevis AAD24207 I 0.000
AAH82435 Xenopus laevis AAH82435 I 0.000
AAI08849 Xenopus laevis AAI08849 I 0.000
Ame_R016002 Ailuropoda melanoleuca Ame_R016002 I 0.000
ENSACAG00000009252 Anolis carolinensis ENSACAG00000009252 I 0.000
LOC100397247 Callithrix jacchus ENSCJAG00000014156 I 0.000
ZFP36 Cavia porcellus ENSCPOG00000011363 I 0.000
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.000
ZFP36 Danio rerio ENSDARG00000044395 I 0.000
Zfp36 Dipodomys ordii ENSDORG00000013487 I 0.000
ZFP36 Homo sapiens ENSG00000128016 D 0.000
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.000
ZFP36 Gorilla gorilla ENSGGOG00000014399 I 0.000
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.000
ZFP36 Myotis lucifugus ENSMLUG00000002942 I 0.000
ZFP36 Monodelphis domestica ENSMODG00000013494 I 0.000
Zfp36 Mus musculus ENSMUSG00000044786 I 0.000
ZFP36 Oryctolagus cuniculus ENSOCUG00000003400 I 0.000
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.000
ENSPPYG00000010577 Pongo pygmaeus ENSPPYG00000010577 I 0.000
ZFP36 Pan troglodytes ENSPTRG00000010968 I 0.000
ZFP36 Pteropus vampyrus ENSPVAG00000011124 I 0.000
Zfp36 Rattus norvegicus ENSRNOG00000019673 I 0.000
ZFP36 Sus scrofa ENSSSCG00000010708 I 0.000
ZFP36 Tupaia belangeri ENSTBEG00000005948 I 0.000
ZFP36 Tursiops truncatus ENSTTRG00000003564 I 0.000
zfp36 Xenopus tropicalis ENSXETG00000002899 I 0.000
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.000
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.000