CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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estExt_fgenesh2_pg.C_210023
(
Monosiga brevicollis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
estExt_fgenesh2_pg.C_210023
T20884_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_210023
KH
783
832
FVKRRQRLIGPNGATLKAIELLTECYILVQGNTVACMGPFKGLKQARRVV
Links
Other
KH
family RBPs
Other
Monosiga brevicollis
RBPs
150 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAA49948
Xenopus laevis
AAA49948
I
0.000
AAB59951
Xenopus laevis
AAB59951
I
0.000
AAH43750
Xenopus laevis
AAH43750
I
0.000
AAH46692
Xenopus laevis
AAH46692
I
0.000
AAI06633
Xenopus laevis
AAI06633
I
0.000
Ame_R000626
Ailuropoda melanoleuca
Ame_R000626
I
0.000
CBF67577
Xenopus laevis
CBF67577
I
0.000
CBU92450
Xenopus laevis
CBU92450
I
0.000
HNRNPA2B1
Anolis carolinensis
ENSACAG00000012992
I
0.000
LOC516616
Bos taurus
ENSBTAG00000002284
I
0.000
ROA2_BOVIN
Bos taurus
ENSBTAG00000005726
I
0.000
ENSBTAG00000011195
Bos taurus
ENSBTAG00000011195
I
0.000
ENSBTAG00000020849
Bos taurus
ENSBTAG00000020849
I
0.000
LOC538435
Bos taurus
ENSBTAG00000038680
I
0.000
HNRNPA2B1
Canis familiaris
ENSCAFG00000002885
I
0.000
HNRNPA2B1
Choloepus hoffmanni
ENSCHOG00000013832
I
0.000
LOC100401647
Callithrix jacchus
ENSCJAG00000007908
I
0.000
ENSCJAG00000021872
Callithrix jacchus
ENSCJAG00000021872
I
0.000
HNRNPA2B1
Dasypus novemcinctus
ENSDNOG00000012928
I
0.000
Hnrnpa2b1
Dipodomys ordii
ENSDORG00000005482
I
0.000
LOC100068539
Equus caballus
ENSECAG00000000782
I
0.000
HNRNPA2B1
Echinops telfairi
ENSETEG00000018577
I
0.000
HNRNPA2B1
Homo sapiens
ENSG00000122566
D
0.000
Q5ZME1_CHICK
Gallus gallus
ENSGALG00000011036
I
0.000
HNRNPA2B1
Gorilla gorilla
ENSGGOG00000017072
I
0.000
HNRNPA2B1
Loxodonta africana
ENSLAFG00000006902
I
0.000
ENSMEUG00000001084
Macropus eugenii
ENSMEUG00000001084
I
0.000
ENSMEUG00000014479
Macropus eugenii
ENSMEUG00000014479
I
0.000
HNRNPA2B1
Meleagris gallopavo
ENSMGAG00000010635
I
0.000
HNRNPA2B1
Myotis lucifugus
ENSMLUG00000007578
I
0.000
HNRNPA2B1
Macaca mulatta
ENSMMUG00000003619
I
0.000
HNRNPA2B1
Monodelphis domestica
ENSMODG00000000603
I
0.000
Hnrnpa2b1
Mus musculus
ENSMUSG00000004980
I
0.000
HNRNPA2B1
Ornithorhynchus anatinus
ENSOANG00000009159
I
0.000
HNRNPA2B1
Oryctolagus cuniculus
ENSOCUG00000026859
I
0.000
ENSPPYG00000017715
Pongo pygmaeus
ENSPPYG00000017715
I
0.000
HNRNPA2B1
Pan troglodytes
ENSPTRG00000019002
I
0.000
HNRNPA2B1
Pteropus vampyrus
ENSPVAG00000006296
I
0.000
Hnrnpa2b1
Rattus norvegicus
ENSRNOG00000011175
I
0.000
D4A1X0_RAT
Rattus norvegicus
ENSRNOG00000021254
I
0.000
ENSSSCG00000012503
Sus scrofa
ENSSSCG00000012503
I
0.000
ENSSSCG00000013557
Sus scrofa
ENSSSCG00000013557
I
0.000
ENSSSCG00000013607
Sus scrofa
ENSSSCG00000013607
I
0.000
ENSSSCG00000015836
Sus scrofa
ENSSSCG00000015836
I
0.000
ENSSSCG00000016710
Sus scrofa
ENSSSCG00000016710
I
0.000
ENSSTOG00000006202
Spermophilus tridecemlineatus
ENSSTOG00000006202
I
0.000
ENSSTOG00000009092
Spermophilus tridecemlineatus
ENSSTOG00000009092
I
0.000
HNRNPA2B1
Tupaia belangeri
ENSTBEG00000003219
I
0.000
HNRNPA2B1
Taeniopygia guttata
ENSTGUG00000002869
I
0.000
HNRNPA2B1
Tursiops truncatus
ENSTTRG00000000709
I
0.000
HNRNPA2B1
Vicugna pacos
ENSVPAG00000010417
I
0.000
hnrnpa2b1
Xenopus tropicalis
ENSXETG00000012170
I
0.000
P51989
Xenopus laevis
P51989
I
0.000
P51990
Xenopus laevis
P51990
I
0.000