AAH41241 (Xenopus laevis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AAH41241 T22111_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.984
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.963
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.926
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.926
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.878
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH41241 KH 15 75
AAH41241 KH 99 162
AAH41241 KH 277 339

Links

Other KH family RBPs
Other Xenopus laevis RBPs

127 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29912.m005480 Ricinus communis 29912.m005480 N 0.000
emb2726 Arabidopsis thaliana AT4G29060-TAIR-G N 0.000
cassava29926.valid.m1 Manihot esculenta cassava29926.valid.m1 N 0.000
cassava8220.valid.m1 Manihot esculenta cassava8220.valid.m1 N 0.000
chr2.CM0660.130.nc Lotus japonicus chr2.CM0660.130.nc N 0.000
Cucsa.263190 Cucumis sativus Cucsa.263190 N 0.000
Glyma01g34700.1 Glycine max Glyma01g34700.1 N 0.000
Glyma08g04060.1 Glycine max Glyma08g04060.1 N 0.000
Glyma09g32600.1 Glycine max Glyma09g32600.1 N 0.000
MDP0000169133 Malus x domestica MDP0000169133 N 0.000
MDP0000484420 Malus x domestica MDP0000484420 N 0.000
Medtr6g098870 Medicago truncatula Medtr6g098870 N 0.000
mgf012735m Mimulus guttatus mgf012735m N 0.000
PDK_20s1481371g001 Phoenix dactylifera PDK_20s1481371g001 N 0.000
PK05605.1 Cannabis sativa PK05605.1 N 0.000
ppa000765m Prunus persica ppa000765m N 0.000