nasonia_NCBI_hmm916274 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm916274 T32297_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Hrb87F
M029_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00029 		0.757
Hrb98DE
M093_0.6 		Drosophila melanogaster RGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00096 		0.736
Hrb98DE
M092_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00095 		0.736
Hrb98DE
M091_0.6 		Drosophila melanogaster GKUAGGK RNAcompete
Ray et al.(2013)
RNCMPT00094 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm916274 RRM 19 88
nasonia_NCBI_hmm916274 RRM 110 179

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010467 Aedes aegypti AAEL010467 I 0.736
AGAP002374 Anopheles gambiae AGAP002374 I 0.750
amel4_ncbi_hmm27519 Apis mellifera amel4_ncbi_hmm27519 I 0.936
BGIBMGA006405 Bombyx mori BGIBMGA006405 I 0.771
CPIJ001612 Culex quinquefasciatus CPIJ001612 I 0.721
CpipJ_CPIJ001612 Culex pipiens CpipJ_CPIJ001612 I 0.721
DGIL_AUG5s14056g7t1 Acyrtosiphon pisum DGIL_AUG5s14056g7t1 N 0.721
Hrb98DE Drosophila melanogaster FBgn0001215 D 0.736
Hrb87F Drosophila melanogaster FBgn0004237 D 0.757
GF17368 Drosophila ananassae FBgn0094386 I 0.750
GF18582 Drosophila ananassae FBgn0095600 I 0.743
GG11603 Drosophila erecta FBgn0103900 I 0.736
GG17033 Drosophila erecta FBgn0109261 I 0.757
GH17116 Drosophila grimshawi FBgn0124586 I 0.764
GH19058 Drosophila grimshawi FBgn0126525 I 0.743
GI10577 Drosophila mojavensis FBgn0133341 I 0.771
GI10692 Drosophila mojavensis FBgn0133456 I 0.743
GL13791 Drosophila persimilis FBgn0151396 I 0.750
GM16385 Drosophila sechellia FBgn0171300 I 0.736
GM25918 Drosophila sechellia FBgn0180774 I 0.750
GD21374 Drosophila simulans FBgn0192810 I 0.736
GJ22934 Drosophila virilis FBgn0210037 I 0.764
GJ23111 Drosophila virilis FBgn0210213 I 0.743
GK12096 Drosophila willistoni FBgn0214107 I 0.729
GK13334 Drosophila willistoni FBgn0215343 I 0.736
GE23791 Drosophila yakuba FBgn0240946 I 0.736
GE24426 Drosophila yakuba FBgn0241543 I 0.743
GA26465-RA Drosophila pseudoobscura FBgn0247839 I 0.750
GA26796-RA Drosophila pseudoobscura FBgn0248169 I 0.750
PASA_GEN_6200011 Daphnia pulex PASA_GEN_6200011 N 0.750