GE23791 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0240946 T44354_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Hrb98DE
M093_0.6 		Drosophila melanogaster RGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00096 		0.986
Hrb98DE
M092_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00095 		0.986
Hrb98DE
M091_0.6 		Drosophila melanogaster GKUAGGK RNAcompete
Ray et al.(2013)
RNCMPT00094 		0.986
Hrb87F
M029_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00029 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0268801 RRM 28 97
FBpp0268801 RRM 119 188

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GG11603 Drosophila erecta FBgn0103900 I 1.000
Hrb98DE Drosophila melanogaster FBgn0001215 D 0.986
GD21374 Drosophila simulans FBgn0192810 I 0.979
GM16385 Drosophila sechellia FBgn0171300 I 0.979
GF18582 Drosophila ananassae FBgn0095600 I 0.971
GL13791 Drosophila persimilis FBgn0151396 I 0.950
GA26796-RA Drosophila pseudoobscura FBgn0248169 I 0.950
GI10577 Drosophila mojavensis FBgn0133341 I 0.950
GJ22934 Drosophila virilis FBgn0210037 I 0.943
GK12096 Drosophila willistoni FBgn0214107 I 0.943
GH17116 Drosophila grimshawi FBgn0124586 I 0.943
GK13334 Drosophila willistoni FBgn0215343 I 0.793
GI10692 Drosophila mojavensis FBgn0133456 I 0.786
GM25918 Drosophila sechellia FBgn0180774 I 0.786
GJ23111 Drosophila virilis FBgn0210213 I 0.786
GH19058 Drosophila grimshawi FBgn0126525 I 0.786
GE24426 Drosophila yakuba FBgn0241543 I 0.786
GF17368 Drosophila ananassae FBgn0094386 I 0.786
GG17033 Drosophila erecta FBgn0109261 I 0.779
Hrb87F Drosophila melanogaster FBgn0004237 D 0.779
GA26465-RA Drosophila pseudoobscura FBgn0247839 I 0.779
amel4_ncbi_hmm27519 Apis mellifera amel4_ncbi_hmm27519 I 0.750
AAEL010467 Aedes aegypti AAEL010467 I 0.750
CpipJ_CPIJ001612 Culex pipiens CpipJ_CPIJ001612 I 0.743
CPIJ001612 Culex quinquefasciatus CPIJ001612 I 0.743
nasonia_NCBI_hmm916274 Nasonia vitripennis nasonia_NCBI_hmm916274 I 0.736
AGAP002374 Anopheles gambiae AGAP002374 I 0.729