GE24426 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0241543 T44358_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Hrb87F
M029_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00029 		0.957
Hrb98DE
M093_0.6 		Drosophila melanogaster RGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00096 		0.779
Hrb98DE
M092_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00095 		0.779
Hrb98DE
M091_0.6 		Drosophila melanogaster GKUAGGK RNAcompete
Ray et al.(2013)
RNCMPT00094 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0269436 RRM 26 95
FBpp0269436 RRM 117 186

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GF17368 Drosophila ananassae FBgn0094386 I 0.993
GG17033 Drosophila erecta FBgn0109261 I 0.986
GA26465-RA Drosophila pseudoobscura FBgn0247839 I 0.979
GI10692 Drosophila mojavensis FBgn0133456 I 0.971
GK13334 Drosophila willistoni FBgn0215343 I 0.971
GJ23111 Drosophila virilis FBgn0210213 I 0.964
GM25918 Drosophila sechellia FBgn0180774 I 0.964
GH19058 Drosophila grimshawi FBgn0126525 I 0.964
Hrb87F Drosophila melanogaster FBgn0004237 D 0.957
AGAP002374 Anopheles gambiae AGAP002374 I 0.800
GF18582 Drosophila ananassae FBgn0095600 I 0.793
GE23791 Drosophila yakuba FBgn0240946 I 0.786
GG11603 Drosophila erecta FBgn0103900 I 0.786
AAEL010467 Aedes aegypti AAEL010467 I 0.786
CpipJ_CPIJ001612 Culex pipiens CpipJ_CPIJ001612 I 0.779
GM16385 Drosophila sechellia FBgn0171300 I 0.779
GD21374 Drosophila simulans FBgn0192810 I 0.779
GK12096 Drosophila willistoni FBgn0214107 I 0.779
GA26796-RA Drosophila pseudoobscura FBgn0248169 I 0.779
Hrb98DE Drosophila melanogaster FBgn0001215 D 0.779
GL13791 Drosophila persimilis FBgn0151396 I 0.779
CPIJ001612 Culex quinquefasciatus CPIJ001612 I 0.779
GH17116 Drosophila grimshawi FBgn0124586 I 0.764
GJ22934 Drosophila virilis FBgn0210037 I 0.764
GI10577 Drosophila mojavensis FBgn0133341 I 0.764
nasonia_NCBI_hmm916274 Nasonia vitripennis nasonia_NCBI_hmm916274 I 0.743
amel4_ncbi_hmm27519 Apis mellifera amel4_ncbi_hmm27519 I 0.736
BGIBMGA006405 Bombyx mori BGIBMGA006405 I 0.700
PASA_GEN_6200011 Daphnia pulex PASA_GEN_6200011 N 0.700