amel4_ncbi_hmm27519 (Apis mellifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm27519 T31900_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Hrb98DE
M093_0.6 		Drosophila melanogaster RGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00096 		0.750
Hrb98DE
M092_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00095 		0.750
Hrb98DE
M091_0.6 		Drosophila melanogaster GKUAGGK RNAcompete
Ray et al.(2013)
RNCMPT00094 		0.750
Hrb87F
M029_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00029 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm27519 RRM 19 88
amel4_ncbi_hmm27519 RRM 110 179

Links

Other RRM family RBPs
Other Apis mellifera RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm916274 Nasonia vitripennis nasonia_NCBI_hmm916274 I 0.936
GJ22934 Drosophila virilis FBgn0210037 I 0.786
GI10577 Drosophila mojavensis FBgn0133341 I 0.786
GH17116 Drosophila grimshawi FBgn0124586 I 0.786
BGIBMGA006405 Bombyx mori BGIBMGA006405 I 0.779
GL13791 Drosophila persimilis FBgn0151396 I 0.771
GA26796-RA Drosophila pseudoobscura FBgn0248169 I 0.771
GF18582 Drosophila ananassae FBgn0095600 I 0.757
GK12096 Drosophila willistoni FBgn0214107 I 0.750
GM16385 Drosophila sechellia FBgn0171300 I 0.750
GD21374 Drosophila simulans FBgn0192810 I 0.750
GG17033 Drosophila erecta FBgn0109261 I 0.750
Hrb98DE Drosophila melanogaster FBgn0001215 D 0.750
Hrb87F Drosophila melanogaster FBgn0004237 D 0.750
GE23791 Drosophila yakuba FBgn0240946 I 0.750
GG11603 Drosophila erecta FBgn0103900 I 0.750
GA26465-RA Drosophila pseudoobscura FBgn0247839 I 0.743
GK13334 Drosophila willistoni FBgn0215343 I 0.743
AAEL010467 Aedes aegypti AAEL010467 I 0.743
AGAP002374 Anopheles gambiae AGAP002374 I 0.743
GM25918 Drosophila sechellia FBgn0180774 I 0.743
GF17368 Drosophila ananassae FBgn0094386 I 0.743
PASA_GEN_6200011 Daphnia pulex PASA_GEN_6200011 N 0.736
GE24426 Drosophila yakuba FBgn0241543 I 0.736
GI10692 Drosophila mojavensis FBgn0133456 I 0.736
GJ23111 Drosophila virilis FBgn0210213 I 0.736
GH19058 Drosophila grimshawi FBgn0126525 I 0.736
DGIL_AUG5s14056g7t1 Acyrtosiphon pisum DGIL_AUG5s14056g7t1 N 0.736
CpipJ_CPIJ001612 Culex pipiens CpipJ_CPIJ001612 I 0.729
CPIJ001612 Culex quinquefasciatus CPIJ001612 I 0.729