Cnot4 (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000038784 T39345_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		1.000
e_gw.71.47.1
M233_0.6 		Nematostella vectensis AGAYASA RNAcompete
Ray et al.(2013)
RNCMPT00278 		0.766
Cnot4
M008_0.6 		Drosophila melanogaster ASACAHW RNAcompete
Ray et al.(2013)
RNCMPT00008 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000044137 RRM 111 187
ENSMUSP00000110640 RRM 111 187
ENSMUSP00000110645 RRM 111 187

Links

Other RRM family RBPs
Other Mus musculus RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_02637 Botrytis cinerea BC1G_02637 N 0.000
AFLA_007170 Aspergillus flavus CADAFLAG00010780 N 0.000
AFUA_5G04340 Aspergillus fumigatus CADAFUAG00002839 N 0.000
AO090102000642 Aspergillus oryzae CADAORAG00009924 N 0.000
NFIA_037730 Neosartorya fischeri CADNFIAG00003211 N 0.000
CHGG_10227 Chaetomium globosum CHGG_10227 N 0.000
CIMG_06323 Coccidioides immitis CIMG_06323 N 0.000
CPSG_00751 Coccidioides posadasii CPSG_00751 N 0.000
EAT91264.2 Phaeosphaeria nodorum EAT91264.2 N 0.000
estExt_fgenesh1_pm.C_130085 Neurospora tetrasperma estExt_fgenesh1_pm.C_130085 N 0.000
e_gw1.2.144.1 Mycosphaerella graminicola e_gw1.2.144.1 N 0.000
fgenesh1_pm.7_#_317 Myceliophthora thermophila fgenesh1_pm.7_#_317 N 0.000
fgenesh2_pm.6_#_443 Thielavia terrestris fgenesh2_pm.6_#_443 N 0.000
FOXG_07983 Fusarium oxysporum FOXG_07983 N 0.000
GLRG_05168 Colletotrichum graminicola GLRG_05168 N 0.000
GSTUMT00009368001 Tuber melanosporum GSTUMT00009368001 N 0.000
gw1.14.69.1 Mycosphaerella fijiensis gw1.14.69.1 N 0.000
MCYG_01907 Microsporum canis MCYG_01907 N 0.000
MGYG_04164 Microsporum gypseum MGYG_04164 N 0.000
NCU01760 Neurospora crassa NCU01760 N 0.000
Pa_3_5000 Podospora anserina Pa_3_5000 N 0.000
PMAA_095580 Penicillium marneffei PMAA_095580 N 0.000
SNOG_01615 Stagonospora nodorum SNOG_01615 N 0.000
SS1G_01761 Sclerotinia sclerotiorum SS1G_01761 N 0.000
TEQG_03139 Trichophyton equinum TEQG_03139 N 0.000
TERG_04493 Trichophyton rubrum TERG_04493 N 0.000
TESG_00492 Trichophyton tonsurans TESG_00492 N 0.000
UREG_04073 Uncinocarpus reesii UREG_04073 N 0.000
VDAG_08882 Verticillium dahliae VDAG_08882 N 0.000
VDBG_05223 Verticillium albo atrum VDBG_05223 N 0.000