CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK14152
(
Drosophila willistoni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0216158
T44176_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0243295
RRM
81
148
AYVGNLPKGLVQGDVMKIFSDFEVKNVRLIKDRETDEFKGYGYVEFETLAQLKRALSCNGRIKLDNYS
Links
Other
RRM
family RBPs
Other
Drosophila willistoni
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB00309.1
Alternaria brassicicola
AB00309.1
N
0.000
ACLA_023580
Aspergillus clavatus
CADACLAG00002187
N
0.000
AFLA_067600
Aspergillus flavus
CADAFLAG00008184
N
0.000
AFUA_1G12000
Aspergillus fumigatus
CADAFUAG00007354
N
0.000
An08g04280
Aspergillus niger
CADANGAG00006749
N
0.000
ANIA_10164
Aspergillus nidulans
CADANIAG00001543
N
0.000
AO090001000353
Aspergillus oryzae
CADAORAG00000317
N
0.000
ATEG_00398
Aspergillus terreus
CADATEAG00007828
N
0.000
NFIA_013530
Neosartorya fischeri
CADNFIAG00000800
N
0.000
CHGG_05573
Chaetomium globosum
CHGG_05573
N
0.000
CIMG_09023
Coccidioides immitis
CIMG_09023
N
0.000
CPSG_01385
Coccidioides posadasii
CPSG_01385
N
0.000
EAT81850.2
Phaeosphaeria nodorum
EAT81850.2
N
0.000
estExt_fgenesh1_pg.C_90049
Trichoderma atroviride
estExt_fgenesh1_pg.C_90049
N
0.000
estExt_fgenesh3_kg.C_200038
Neurospora discreta
estExt_fgenesh3_kg.C_200038
N
0.000
estExt_Genewise1.C_11570
Cochliobolus heterostrophus C5
estExt_Genewise1.C_11570
N
0.000
estExt_Genewise1.C_140496
Mycosphaerella fijiensis
estExt_Genewise1.C_140496
N
0.000
estExt_Genewise1Plus.C_11264
Cryphonectria parasitica
estExt_Genewise1Plus.C_11264
N
0.000
estExt_Genewise1Plus.C_32201
Thielavia terrestris
estExt_Genewise1Plus.C_32201
N
0.000
estExt_Genewise1Plus.C_sca_10_chr8_2_00705
Nectria haematococca
estExt_Genewise1Plus.C_sca_10_chr8_2_00705
N
0.000
estExt_GeneWisePlus.C_11433
Trichoderma reesei
estExt_GeneWisePlus.C_11433
N
0.000
e_gw1.2.1591.1
Mycosphaerella graminicola
e_gw1.2.1591.1
N
0.000
e_gw1.32.97.1
Trichoderma virens
e_gw1.32.97.1
N
0.000
fgenesh1_pm.00083_#_553
Aspergillus carbonarius
fgenesh1_pm.00083_#_553
N
0.000
FGSG_05417
Fusarium graminearum
FGSG_05417
N
0.000
FOXG_09482
Fusarium oxysporum
FOXG_09482
N
0.000
FVEG_07111
Fusarium verticillioides
FVEG_07111
N
0.000
GLRG_08449
Colletotrichum graminicola
GLRG_08449
N
0.000
GSTUMT00010135001
Tuber melanosporum
GSTUMT00010135001
N
0.000
HCAG_09244
Histoplasma capsulatum
HCAG_09244
N
0.000
MCYG_03737
Microsporum canis
MCYG_03737
N
0.000
MGYG_03339
Microsporum gypseum
MGYG_03339
N
0.000
NCU07874
Neurospora crassa
NCU07874
N
0.000
PABG_03400
Paracoccidioides brasiliensis
PABG_03400
N
0.000
Pa_7_10990
Podospora anserina
Pa_7_10990
N
0.000
Pc12g15120
Penicillium chrysogenum
Pc12g15120
N
0.000
PMAA_098010
Penicillium marneffei
PMAA_098010
N
0.000
PTRG_10065
Pyrenophora tritici repentis
PTRG_10065
N
0.000
SNOG_10456
Stagonospora nodorum
SNOG_10456
N
0.000
SS1G_03339
Sclerotinia sclerotiorum
SS1G_03339
N
0.000
TEQG_03955
Trichophyton equinum
TEQG_03955
N
0.000
TERG_05178
Trichophyton rubrum
TERG_05178
N
0.000
TESG_05056
Trichophyton tonsurans
TESG_05056
N
0.000
VDAG_06648
Verticillium dahliae
VDAG_06648
N
0.000
VDBG_07004
Verticillium albo atrum
VDBG_07004
N
0.000