PTRG_10065 (Pyrenophora tritici repentis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PTRG_10065 T30245_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_10065 RRM 85 161
PTRT_10065 RRM 167 237
PTRT_10065 RRM 293 357

Links

Other RRM family RBPs
Other Pyrenophora tritici repentis RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB00309.1 Alternaria brassicicola AB00309.1 N 0.991
EAT81850.2 Phaeosphaeria nodorum EAT81850.2 N 0.977
SNOG_10456 Stagonospora nodorum SNOG_10456 N 0.977
estExt_Genewise1.C_11570 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11570 N 0.977
e_gw1.2.1591.1 Mycosphaerella graminicola e_gw1.2.1591.1 N 0.878
CIMG_09023 Coccidioides immitis CIMG_09023 N 0.878
An08g04280 Aspergillus niger CADANGAG00006749 N 0.873
CPSG_01385 Coccidioides posadasii CPSG_01385 N 0.873
PABG_03400 Paracoccidioides brasiliensis PABG_03400 N 0.869
fgenesh1_pm.00083_#_553 Aspergillus carbonarius fgenesh1_pm.00083_#_553 N 0.869
MGYG_03339 Microsporum gypseum MGYG_03339 N 0.864
ACLA_023580 Aspergillus clavatus CADACLAG00002187 N 0.864
MCYG_03737 Microsporum canis MCYG_03737 N 0.864
NCU07874 Neurospora crassa NCU07874 N 0.864
GSTUMT00010135001 Tuber melanosporum GSTUMT00010135001 N 0.859
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.859
estExt_Genewise1.C_140496 Mycosphaerella fijiensis estExt_Genewise1.C_140496 N 0.859
AO090001000353 Aspergillus oryzae CADAORAG00000317 N 0.859
ANIA_10164 Aspergillus nidulans CADANIAG00001543 N 0.859
TERG_05178 Trichophyton rubrum TERG_05178 N 0.859
TEQG_03955 Trichophyton equinum TEQG_03955 N 0.859
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.859
AFLA_067600 Aspergillus flavus CADAFLAG00008184 N 0.859
NFIA_013530 Neosartorya fischeri CADNFIAG00000800 N 0.859
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.854
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.854
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.854
SS1G_03339 Sclerotinia sclerotiorum SS1G_03339 N 0.850
Pc12g15120 Penicillium chrysogenum Pc12g15120 N 0.845
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 Nectria haematococca estExt_Genewise1Plus.C_sca_10_chr8_2_00705 N 0.845
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.841
PMAA_098010 Penicillium marneffei PMAA_098010 N 0.840
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.840
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.836
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.836
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.831
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.826
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.826
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.812
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.803
HCAG_09244 Histoplasma capsulatum HCAG_09244 N 0.756
TESG_05056 Trichophyton tonsurans TESG_05056 N 0.732
AFUA_1G12000 Aspergillus fumigatus CADAFUAG00007354 N 0.723