estExt_Genewise1Plus.C_40228 (Batrachochytrium dendrobatidis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_40228 T51459_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_40228 RRM 309 379

Links

Other RRM family RBPs
Other Batrachochytrium dendrobatidis RBPs

181 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
83285 Helobdella robusta 83285 N 0.775
AAEL005541 Aedes aegypti AAEL005541 N 0.732
AAEL005690 Aedes aegypti AAEL005690 N 0.732
AB03196.1 Alternaria brassicicola AB03196.1 N 0.746
AGAP008136 Anopheles gambiae AGAP008136 N 0.732
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.718
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.718
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.789
Aqu1.223583 Amphimedon queenslandica Aqu1.223583 N 0.761
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.761
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.746
BDBG_04009 Blastomyces dermatitidis BDBG_04009 N 0.746
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.761
BRADI2G41160 Brachypodium distachyon BRADI2G41160 N 0.704
ACLA_065360 Aspergillus clavatus CADACLAG00006149 N 0.746
AFLA_071340 Aspergillus flavus CADAFLAG00008558 N 0.746
AFUA_7G02170 Aspergillus fumigatus CADAFUAG00001177 N 0.746
An12g00490 Aspergillus niger CADANGAG00009498 N 0.746
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.761
AO090038000594 Aspergillus oryzae CADAORAG00009343 N 0.746
ATEG_01850 Aspergillus terreus CADATEAG00001841 N 0.732
NFIA_114890 Neosartorya fischeri CADNFIAG00010434 N 0.746
CAOG_07850 Capsaspora owczarzaki CAOG_07850 N 0.761
CBG12494 Caenorhabditis briggsae CBG12494 N 0.704
CBN08292 Caenorhabditis brenneri CBN08292 N 0.704
cgd8_2350 Cryptosporidium parvum cgd8_2350 N 0.704
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.761
Chro.80276 Cryptosporidium hominis Chro.80276 N 0.704
CIMG_07762 Coccidioides immitis CIMG_07762 N 0.746
CJA06296 Caenorhabditis japonica CJA06296 N 0.704
CMU_026350 Cryptosporidium muris CMU_026350 N 0.718
CNBG_1409 Cryptococcus neoformans CNBG_1409 N 0.732
CPIJ000912 Culex quinquefasciatus CPIJ000912 N 0.732
CpipJ_CPIJ000912 Culex pipiens CpipJ_CPIJ000912 N 0.732
CPSG_09333 Coccidioides posadasii CPSG_09333 N 0.746
CRE29496 Caenorhabditis remanei CRE29496 N 0.704
DGIL_AUG5s502g5t1 Acyrtosiphon pisum DGIL_AUG5s502g5t1 N 0.704
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.761
EDI_110230 Entamoeba dispar EDI_110230 N 0.718
EDI_110350 Entamoeba dispar EDI_110350 N 0.718
EDI_199260 Entamoeba dispar EDI_199260 N 0.718
EHI_054760 Entamoeba histolytica EHI_054760 N 0.704
EIN_223600 Entamoeba invadens EIN_223600 N 0.718
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.803
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.789
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.789
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.761
PPIL4 Callithrix jacchus ENSCJAG00000019613 N 0.750
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.789
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.761
ppil4 Danio rerio ENSDARG00000043854 N 0.803
PPIL4 Equus caballus ENSECAG00000021819 N 0.789
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.775
PPIL4 Homo sapiens ENSG00000131013 N 0.789
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.775
PPIL4 Gallus gallus ENSGALG00000012364 N 0.803
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.789
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.789
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.803
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.789
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.789
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.789
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.789
Ppil4 Mus musculus ENSMUSG00000015757 N 0.789
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.803
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.789
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.789
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.789
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.789
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.789
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.789
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.789
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.789
PPIL4 Sorex araneus ENSSARG00000011244 N 0.789
PPIL4 Spermophilus tridecemlineatus ENSSTOG00000013980 N 0.761
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.789
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.775
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.789
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.789
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.789
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.803
estExt_fgenesh1_kg.C_170006 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_170006 N 0.746
estExt_fgenesh1_kg.C_40083 Melampsora laricis populina estExt_fgenesh1_kg.C_40083 N 0.732
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.732
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.761
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.746
estExt_fgenesh3_pm.C_240021 Chlorella NC64A estExt_fgenesh3_pm.C_240021 N 0.732
estExt_fgeneshCV_pg.C_40316 Chlorella vulgaris estExt_fgeneshCV_pg.C_40316 N 0.718
estExt_Genewise1.C_180101 Capitella teleta estExt_Genewise1.C_180101 N 0.775
estExt_Genewise1.C_23809 Thielavia terrestris estExt_Genewise1.C_23809 N 0.761
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.775
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.746
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.803
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.775
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.789
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.803
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.746
EuGene.1200010297 Ostreococcus RCC809 EuGene.1200010297 N 0.718
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.817
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.746
e_gw1.20.215.1 Phycomyces blakesleeanus e_gw1.20.215.1 N 0.775
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.732
e_gw1.4.370.1 Sporobolomyces roseus e_gw1.4.370.1 N 0.718
e_gw1.4.423.1 Coccomyxa C 169 e_gw1.4.423.1 N 0.718
e_gw1.6.1078.1 Selaginella moellendorfii e_gw1.6.1078.1 N 0.718
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.775
e_gww1.4.788.1 Laccaria bicolor e_gww1.4.788.1 N 0.732
e_gww2.22.65.1 Phanerochaete chrysosporium e_gww2.22.65.1 N 0.732
sig-7 Caenorhabditis elegans F39H2.2 N 0.704
CG5808 Drosophila melanogaster FBgn0027617 N 0.704
GF18772 Drosophila ananassae FBgn0095789 N 0.718
GG12319 Drosophila erecta FBgn0104609 N 0.704
GH18460 Drosophila grimshawi FBgn0125927 N 0.718
GI24038 Drosophila mojavensis FBgn0146761 N 0.718
GL13859 Drosophila persimilis FBgn0151464 N 0.718
GM23461 Drosophila sechellia FBgn0178328 N 0.704
GD18267 Drosophila simulans FBgn0189800 N 0.704
GJ23668 Drosophila virilis FBgn0210765 N 0.718
GK13166 Drosophila willistoni FBgn0215175 N 0.704
GE10772 Drosophila yakuba FBgn0228614 N 0.704
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.718
fgenesh1_pm.00868_#_101 Aspergillus carbonarius fgenesh1_pm.00868_#_101 N 0.746
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.746
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.746
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.789
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.761
fgenesh2_pm.4_#_1016 Serpula lacrymans fgenesh2_pm.4_#_1016 N 0.718
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.732
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.775
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.761
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.775
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.775
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.718
GSTUMT00009813001 Tuber melanosporum GSTUMT00009813001 N 0.746
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.803
gw1.12.00.150.1 Ostreococcus tauri gw1.12.00.150.1 N 0.718
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.746
gwEuk.12.143.1 Ostreococcus lucimarinus gwEuk.12.143.1 N 0.746
HCAG_04417 Histoplasma capsulatum HCAG_04417 N 0.746
LOAG_08216 Loa loa LOAG_08216 N 0.775
MCYG_06073 Microsporum canis MCYG_06073 N 0.761
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.775
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.761
Minc10084 Meloidogyne incognita Minc10084 N 0.746
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.732
NCU10166 Neurospora crassa NCU10166 N 0.803
PABG_01156 Paracoccidioides brasiliensis PABG_01156 N 0.746
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.803
Pc21g11960 Penicillium chrysogenum Pc21g11960 N 0.746
PF08_0086 Plasmodium falciparum PF08_0086 N 0.732
PGTG_10482 Puccinia graminis PGTG_10482 N 0.732
PGTG_14680 Puccinia graminis PGTG_14680 N 0.704
PHUM268300 Pediculus humanus PHUM268300 N 0.746
PMAA_010740 Penicillium marneffei PMAA_010740 N 0.761
PredSwiss_ASS2010_933.2 Pneumocystis carinii PredSwiss_ASS2010_933.2 N 0.746
PredSwiss_CON599.3 Pneumocystis carinii PredSwiss_CON599.3 N 0.746
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.761
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.817
PTTG_06854 Puccinia triticina PTTG_06854 N 0.746
RO3G_06974 Rhizopus oryzae RO3G_06974 N 0.775
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.761
Sjc_0091550 Schistosoma japonicum Sjc_0091550 N 0.718
Smp_165540 Schistosoma mansoni Smp_165540 N 0.704
SNAPOd2T00004354001 Oikopleura dioica SNAPOd2T00004354001 N 0.746
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.761
SOCG_02586 Schizosaccharomyces octosporus SOCG_02586 N 0.732
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.746
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.761
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.831
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.761
TERG_06028 Trichophyton rubrum TERG_06028 N 0.761
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.761
UM03490 Ustilago maydis UM03490 N 0.732
UREG_02113 Uncinocarpus reesii UREG_02113 N 0.746
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.746
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.746
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.761
XP_001180629.1 Strongylocentrotus purpuratus XP_001180629.1 N 0.775
XP_001192414.1 Strongylocentrotus purpuratus XP_001192414.1 N 0.775
XP_782627.2 Strongylocentrotus purpuratus XP_782627.2 N 0.775
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.775