estExt_Genewise1Plus.C_sca_10_chr8_2_00705 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_sca_10_chr8_2_00705 T51531_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 RRM 86 155
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 RRM 176 246
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 RRM 302 366

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB00309.1 Alternaria brassicicola AB00309.1 N 0.854
ACLA_023580 Aspergillus clavatus CADACLAG00002187 N 0.880
AFLA_067600 Aspergillus flavus CADAFLAG00008184 N 0.885
AFUA_1G12000 Aspergillus fumigatus CADAFUAG00007354 N 0.736
An08g04280 Aspergillus niger CADANGAG00006749 N 0.890
ANIA_10164 Aspergillus nidulans CADANIAG00001543 N 0.889
AO090001000353 Aspergillus oryzae CADAORAG00000317 N 0.885
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.890
NFIA_013530 Neosartorya fischeri CADNFIAG00000800 N 0.889
CHGG_05573 Chaetomium globosum CHGG_05573 N 0.787
CIMG_09023 Coccidioides immitis CIMG_09023 N 0.918
CPSG_01385 Coccidioides posadasii CPSG_01385 N 0.923
EAT81850.2 Phaeosphaeria nodorum EAT81850.2 N 0.859
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.937
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.961
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.895
estExt_Genewise1.C_11570 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11570 N 0.854
estExt_Genewise1.C_140496 Mycosphaerella fijiensis estExt_Genewise1.C_140496 N 0.880
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.947
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.952
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.971
e_gw1.2.1591.1 Mycosphaerella graminicola e_gw1.2.1591.1 N 0.895
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.985
fgenesh1_pm.00083_#_553 Aspergillus carbonarius fgenesh1_pm.00083_#_553 N 0.885
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.956
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.981
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.981
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.971
GSTUMT00010135001 Tuber melanosporum GSTUMT00010135001 N 0.899
HCAG_09244 Histoplasma capsulatum HCAG_09244 N 0.812
MCYG_03737 Microsporum canis MCYG_03737 N 0.904
MGYG_03339 Microsporum gypseum MGYG_03339 N 0.882
NCU07874 Neurospora crassa NCU07874 N 0.952
PABG_03400 Paracoccidioides brasiliensis PABG_03400 N 0.913
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.952
Pc12g15120 Penicillium chrysogenum Pc12g15120 N 0.865
PMAA_098010 Penicillium marneffei PMAA_098010 N 0.880
PTRG_10065 Pyrenophora tritici repentis PTRG_10065 N 0.845
SNOG_10456 Stagonospora nodorum SNOG_10456 N 0.859
SS1G_03339 Sclerotinia sclerotiorum SS1G_03339 N 0.899
TEQG_03955 Trichophyton equinum TEQG_03955 N 0.899
TERG_05178 Trichophyton rubrum TERG_05178 N 0.899
TESG_05056 Trichophyton tonsurans TESG_05056 N 0.746
VDAG_06648 Verticillium dahliae VDAG_06648 N 0.733
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.922