Medtr1g137330 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr1g137330 T54444_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr1g137330.1 RRM 55 125

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.000
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.000
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.000
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.000
An04g00680 Aspergillus niger CADANGAG00003776 N 0.000
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.000
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.000
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.000
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.704
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.704
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.000
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.000
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.761
e_gw1.16.107.1 Emiliania huxleyi e_gw1.16.107.1 N 0.000
e_gw1.8.125.1 Emiliania huxleyi e_gw1.8.125.1 N 0.000
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.000
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.000
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.000
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.704
gw1.45.178.1 Lottia gigantea gw1.45.178.1 N 0.000
gw1.5.1084.1 Ostreococcus RCC809 gw1.5.1084.1 N 0.000
gwEuk.5.447.1 Ostreococcus lucimarinus gwEuk.5.447.1 N 0.000
MCYG_01275 Microsporum canis MCYG_01275 N 0.000
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.000
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.000
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.732