GSTUMT00005304001 (Tuber melanosporum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSTUMT00005304001 T56934_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSTUMT00005304001 RRM 164 234

Links

Other RRM family RBPs
Other Tuber melanosporum RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.732
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.732
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.732
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.789
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.718
AB09303.1 Alternaria brassicicola AB09303.1 N 0.887
ACR235W Ashbya gossypii ACR235W N 0.732
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.873
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.887
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.915
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.901
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.901
An16g01800 Aspergillus niger CADANGAG00012651 N 0.901
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.901
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.901
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.901
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.901
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.732
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.775
CHGG_08312 Chaetomium globosum CHGG_08312 N 0.704
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.845
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.775
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.761
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.845
CTRG_00938 Candida tropicalis CTRG_00938 N 0.761
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.761
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.873
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.775
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.859
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.887
estExt_fgenesh2_pm.C_60019 Thielavia terrestris estExt_fgenesh2_pm.C_60019 N 0.704
estExt_Genewise1.C_110656 Neurospora discreta estExt_Genewise1.C_110656 N 0.718
estExt_Genewise1Plus.C_570036 Neurospora tetrasperma estExt_Genewise1Plus.C_570036 N 0.718
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.845
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.901
fgenesh1_pm.7_#_729 Myceliophthora thermophila fgenesh1_pm.7_#_729 N 0.704
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.901
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.746
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.718
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.718
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.775
MCYG_02010 Microsporum canis MCYG_02010 N 0.873
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.873
NCU05343 Neurospora crassa NCU05343 N 0.718
PIN4 Candida albicans orf19.2534 N 0.775
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.887
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.901
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.761
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.901
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.887
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.746
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.746
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.732
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.873
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.803
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.873
TERG_04408 Trichophyton rubrum TERG_04408 N 0.873
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.873
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.873
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.859
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.732
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.831
PIN4 Saccharomyces cerevisiae YBL051C N 0.746
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.718