CIMG_06397 (Coccidioides immitis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CIMG_06397 T28678_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CIMG_06397T0 RRM 172 242

Links

Other RRM family RBPs
Other Coccidioides immitis RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPSG_00675 Coccidioides posadasii CPSG_00675 N 1.000
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.972
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.958
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.958
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.958
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.958
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.958
TERG_04408 Trichophyton rubrum TERG_04408 N 0.958
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.958
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.958
MCYG_02010 Microsporum canis MCYG_02010 N 0.958
An16g01800 Aspergillus niger CADANGAG00012651 N 0.944
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.944
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.944
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.944
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.944
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.944
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.944
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.944
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.944
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.944
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.930
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.915
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.873
AB09303.1 Alternaria brassicicola AB09303.1 N 0.873
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.873
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.859
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.845
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.845
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.845
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.817
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.803
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.761
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.761
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.761
PIN4 Candida albicans orf19.2534 N 0.746
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.746
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.746
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.746
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.746
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.746
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.746
FVEG_09726 Fusarium verticillioides FVEG_09726 N 0.746
CTRG_00938 Candida tropicalis CTRG_00938 N 0.746
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.732
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.732
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.732
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.732
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.732
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.732
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.732
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.732
VDBG_05689 Verticillium albo atrum VDBG_05689 N 0.718
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.718
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.718
VDAG_07628 Verticillium dahliae VDAG_07628 N 0.718
PIN4 Saccharomyces cerevisiae YBL051C N 0.718
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.704
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.704
NCU05343 Neurospora crassa NCU05343 N 0.704
estExt_Genewise1Plus.C_570036 Neurospora tetrasperma estExt_Genewise1Plus.C_570036 N 0.704
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.704
estExt_Genewise1.C_110656 Neurospora discreta estExt_Genewise1.C_110656 N 0.704
MGG_06218 Magnaporthe oryzae MGG_06218 N 0.704
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.704
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.704
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.704
ACR235W Ashbya gossypii ACR235W N 0.704
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.704
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.704
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.704
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.704