SNOG_09039 (Stagonospora nodorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SNOG_09039 T30621_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNOT_09039 RRM 159 229

Links

Other RRM family RBPs
Other Stagonospora nodorum RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 1.000
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.944
AB09303.1 Alternaria brassicicola AB09303.1 N 0.944
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.930
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.887
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.887
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.873
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.873
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.873
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.873
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.873
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.873
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.873
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.873
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.873
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.873
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.873
An16g01800 Aspergillus niger CADANGAG00012651 N 0.873
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.859
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.859
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.859
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.845
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.845
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.845
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.845
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.845
TERG_04408 Trichophyton rubrum TERG_04408 N 0.845
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.845
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.845
MCYG_02010 Microsporum canis MCYG_02010 N 0.845
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.845
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.803
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.789
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.746
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.746
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.746
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.746
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.746
CTRG_00938 Candida tropicalis CTRG_00938 N 0.732
PIN4 Candida albicans orf19.2534 N 0.732
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.732
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.732
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.732
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.732
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.732
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.718
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.718
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.718
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.718
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.718
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.718
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.718
FVEG_09726 Fusarium verticillioides FVEG_09726 N 0.718
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.718
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.718
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.718
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.718
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.704
PIN4 Saccharomyces cerevisiae YBL051C N 0.704
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.704
MGG_06218 Magnaporthe oryzae MGG_06218 N 0.704
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.704
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.704
ACR235W Ashbya gossypii ACR235W N 0.704