AAH45063 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH45063 T59469_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.986
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH45063 RRM 164 233

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

108 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.000
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.000
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.000
An08g01040 Aspergillus niger CADANGAG00006423 N 0.000
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.000
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.000
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.000
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.000
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.000
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.000
EDP44971.1 Malassezia globosa EDP44971.1 N 0.700
PABPN1 Monodelphis domestica ENSMODG00000004535 I 0.943
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.000
estExt_fgenesh1_pg.C_120138 Phytophthora capsici estExt_fgenesh1_pg.C_120138 N 0.000
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.000
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.000
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.000
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.000
e_gw1.14.113.1 Trichoplax adhaerens e_gw1.14.113.1 I 0.886
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.714
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.000
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.000
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.000
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.000
fgenesh2_pm.scaffold_317000002 Branchiostoma floridae fgenesh2_pm.scaffold_317000002 I 0.845
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.000
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.000
gwEuk.4.69.1 Phytophthora ramorum gwEuk.4.69.1 N 0.000
MCYG_08495 Microsporum canis MCYG_08495 N 0.000
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.000
NCU03946 Neurospora crassa NCU03946 N 0.000
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.000
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.000
PGTG_01300 Puccinia graminis PGTG_01300 N 0.700
PITG_15784 Phytophthora infestans PITG_15784 N 0.000
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.000
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.000
PTTG_05043 Puccinia triticina PTTG_05043 N 0.700
Q7ZXB8 Xenopus laevis Q7ZXB8 I 1.000
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.000
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.000
SPRG_02264 Saprolegnia parasitica SPRG_02264 N 0.000
s_459723 Phytophthora sojae s_459723 N 0.000
TERG_02884 Trichophyton rubrum TERG_02884 N 0.000
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.000
UM02401 Ustilago maydis UM02401 N 0.700
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.000
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.000
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.000