e_gw1.14.113.1 (Trichoplax adhaerens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.14.113.1 T49773_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.900
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.14.113.1 RRM 13 82

Links

Other RRM family RBPs
Other Trichoplax adhaerens RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPN1 Ornithorhynchus anatinus ENSOANG00000009218 I 0.914
PABPN1 Monodelphis domestica ENSMODG00000004535 I 0.914
PABPN1 Gorilla gorilla ENSGGOG00000022683 I 0.900
PABPN1 Loxodonta africana ENSLAFG00000031227 I 0.900
LOC100055599 Equus caballus ENSECAG00000011652 I 0.900
Pabpn1 Dipodomys ordii ENSDORG00000002873 I 0.900
PABP2_BOVIN Bos taurus ENSBTAG00000006884 I 0.900
B2CL2_CANFA Canis familiaris ENSCAFG00000011482 I 0.900
LOC100396934 Callithrix jacchus ENSCJAG00000007960 I 0.900
PABPN1 Cavia porcellus ENSCPOG00000025574 I 0.900
PABPN1 Macaca mulatta ENSMMUG00000014747 I 0.900
Pabpn1 Mus musculus ENSMUSG00000022194 I 0.900
PABPN1 Pteropus vampyrus ENSPVAG00000005270 I 0.900
Pabpn1 Rattus norvegicus ENSRNOG00000042195 I 0.900
PABPN1 Sus scrofa ENSSSCG00000002023 I 0.900
PABPN1 Pan troglodytes ENSPTRG00000006168 I 0.900
ENSPPYG00000005663 Pongo pygmaeus ENSPPYG00000005663 I 0.900
PABPN1 Oryctolagus cuniculus ENSOCUG00000016174 I 0.900
PABPN1 Otolemur garnettii ENSOGAG00000008710 I 0.900
ENSBTAG00000001853 Bos taurus ENSBTAG00000001853 I 0.900
PABPN1 Homo sapiens ENSG00000100836 D 0.900
Ame_R020627 Ailuropoda melanoleuca Ame_R020627 I 0.900
Q7ZXB8 Xenopus laevis Q7ZXB8 I 0.886
AAH45063 Xenopus laevis AAH45063 I 0.886
gw1.9.516.1 Lottia gigantea gw1.9.516.1 I 0.873
pabpn1 Danio rerio ENSDARG00000045373 I 0.873
pabpn1 Xenopus tropicalis ENSXETG00000014597 I 0.871
Q9DDY9 Xenopus laevis Q9DDY9 I 0.871
AAR26262 Xenopus laevis AAR26262 I 0.871
AAH73657 Xenopus laevis AAH73657 I 0.871
AAG36902 Xenopus laevis AAG36902 I 0.871
PABPN1 Anolis carolinensis ENSACAG00000006185 I 0.871
PABPN1 Myotis lucifugus ENSMLUG00000012452 I 0.871
DGIL_AUG5s13013g8t1 Acyrtosiphon pisum DGIL_AUG5s13013g8t1 I 0.871
PABPN1 Gasterosteus aculeatus ENSGACG00000002167 I 0.859
e_gw.21.136.1 Nematostella vectensis e_gw.21.136.1 I 0.859
PABPN1 Oryzias latipes ENSORLG00000006136 I 0.859
PABPN1 Tetraodon nigroviridis ENSTNIG00000005369 I 0.859
PABPN1 Takifugu rubripes ENSTRUG00000006554 I 0.859
ENSEEUG00000012973 Erinaceus europaeus ENSEEUG00000012973 I 0.857
BGIBMGA001950 Bombyx mori BGIBMGA001950 I 0.857
fgenesh2_pm.scaffold_317000002 Branchiostoma floridae fgenesh2_pm.scaffold_317000002 I 0.845
XP_002163300.1 Hydra magnipapillata XP_002163300.1 I 0.843
ENSOCUG00000008701 Oryctolagus cuniculus ENSOCUG00000008701 I 0.843
estExt_Genewise1.C_30355 Daphnia pulex estExt_Genewise1.C_30355 I 0.843
estExt_Genewise1Plus.C_2670068 Capitella teleta estExt_Genewise1Plus.C_2670068 I 0.843
LOAG_03634 Loa loa LOAG_03634 I 0.831
WUBG_04965 Wuchereria bancrofti WUBG_04965 I 0.831
Bm1_48895 Brugia malayi Bm1_48895 I 0.831
PHUM037550 Pediculus humanus PHUM037550 I 0.829
estExt_fgenesh1_pm.C_1750006 Capitella teleta estExt_fgenesh1_pm.C_1750006 I 0.829
amel4_ncbi_hmm446 Apis mellifera amel4_ncbi_hmm446 I 0.829
e_gw.341.11.1 Branchiostoma floridae e_gw.341.11.1 I 0.800
Aqu1.225190 Amphimedon queenslandica Aqu1.225190 I 0.789
156918 Helobdella robusta 156918 I 0.786
CBN10290 Caenorhabditis brenneri CBN10290 I 0.786
CBG03741 Caenorhabditis briggsae CBG03741 I 0.786
PABPN1 Procavia capensis ENSPCAG00000005902 I 0.786
CJA15148 Caenorhabditis japonica CJA15148 I 0.786
CRE07990 Caenorhabditis remanei CRE07990 I 0.786
CBN00953 Caenorhabditis brenneri CBN00953 I 0.786
CBN16301 Caenorhabditis brenneri CBN16301 I 0.771
pabp-2 Caenorhabditis elegans C17E4.5 I 0.771
ENSCING00000012468 Ciona intestinalis ENSCING00000012468 I 0.761
GF13666 Drosophila ananassae FBgn0090694 I 0.757
GA15278-RA Drosophila pseudoobscura FBgn0075302 I 0.757
AAEL015143 Aedes aegypti AAEL015143 I 0.757
PABPN1L Takifugu rubripes ENSTRUG00000017251 I 0.757
PABPN1L Tetraodon nigroviridis ENSTNIG00000009416 I 0.757
AGAP005117 Anopheles gambiae AGAP005117 I 0.757
Pabp2 Drosophila melanogaster FBgn0005648 I 0.757
Pabp2 Drosophila yakuba FBgn0068105 I 0.757
GG23338 Drosophila erecta FBgn0115489 I 0.757
XM_001100533.1 Macaca mulatta ENSMMUG00000012438 I 0.757
SNAPOd2T00018428001 Oikopleura dioica SNAPOd2T00018428001 I 0.757
GJ22134 Drosophila virilis FBgn0209248 I 0.757
GM21011 Drosophila sechellia FBgn0175892 I 0.757
GD10545 Drosophila simulans FBgn0182316 I 0.757
XM_001117810.1 Macaca mulatta ENSMMUG00000029383 I 0.757
CpipJ_CPIJ004581 Culex pipiens CpipJ_CPIJ004581 I 0.757
GK23192 Drosophila willistoni FBgn0225154 I 0.757
GH21908 Drosophila grimshawi FBgn0129369 I 0.757
GI19259 Drosophila mojavensis FBgn0141998 I 0.757
CPIJ004581 Culex quinquefasciatus CPIJ004581 I 0.757
GL17107 Drosophila persimilis FBgn0154711 I 0.743
PABPN1L Anolis carolinensis ENSACAG00000013250 I 0.743
PABPN1L Homo sapiens ENSG00000205022 I 0.743
PABPN1L Ornithorhynchus anatinus ENSOANG00000013901 I 0.743
SNAPOd2T00003132001 Oikopleura dioica SNAPOd2T00003132001 I 0.743
PABPN1L Pan troglodytes ENSPTRG00000031120 I 0.743
PABPN1L Gasterosteus aculeatus ENSGACG00000015428 I 0.743
PABPN1 Gallus gallus ENSGALG00000006242 I 0.743
ENSPPYG00000007655 Pongo pygmaeus ENSPPYG00000007655 I 0.743
XP_799120.1 Strongylocentrotus purpuratus XP_799120.1 I 0.732
PPA11675 Pristionchus pacificus PPA11675 I 0.718
ENSCSAVG00000002001 Ciona savignyi ENSCSAVG00000002001 I 0.718
PABPN1L Monodelphis domestica ENSMODG00000003873 N 0.714
Smp_007630 Schistosoma mansoni Smp_007630 I 0.714
PABPN1L Oryzias latipes ENSORLG00000005534 I 0.714
Sjc_0053490 Schistosoma japonicum Sjc_0053490 I 0.714
PABPN1L Otolemur garnettii ENSOGAG00000000433 I 0.704
PGTG_01300 Puccinia graminis PGTG_01300 N 0.700
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.700
PTTG_05043 Puccinia triticina PTTG_05043 N 0.700