CNBP (Taeniopygia guttata)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSTGUG00000004001 T10506_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000004115 CCHC ZF 4 21
ENSTGUP00000004115 CCHC ZF 45 61
ENSTGUP00000004115 CCHC ZF 65 82
ENSTGUP00000004115 CCHC ZF 89 106
ENSTGUP00000004115 CCHC ZF 110 127
ENSTGUP00000004115 CCHC ZF 128 145
ENSTGUP00000004115 CCHC ZF 149 166

Links

Other CCHC ZF family RBPs
Other Taeniopygia guttata RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CAA69031 Xenopus laevis CAA69031 N 0.968
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.952
CNBP Pan troglodytes ENSPTRG00000015369 N 0.992
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.992
CNBP Procavia capensis ENSPCAG00000011572 N 0.992
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.738
CNBP Ochotona princeps ENSOPRG00000005487 N 0.992
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.984
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.992
ZCCHC13 Oryctolagus cuniculus ENSOCUG00000008008 N 0.817
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.992
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.984
CNBP Sorex araneus ENSSARG00000011874 N 0.992
ZCCHC13 Sus scrofa ENSSSCG00000012417 N 0.848
AAI69746 Xenopus laevis AAI69746 N 0.992
AAA81168 Xenopus laevis AAA81168 N 0.984
Ame_R012991 Ailuropoda melanoleuca Ame_R012991 N 0.768
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.992
cnbp Xenopus tropicalis ENSXETG00000025147 N 1.000
CNBP Vicugna pacos ENSVPAG00000007138 N 0.984
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.992
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.984
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.730
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.992
Zcchc13 Mus musculus ENSMUSG00000031330 N 0.800
Cnbp Mus musculus ENSMUSG00000030057 N 0.992
ENSDORG00000019792 Dipodomys ordii ENSDORG00000019792 N 0.784
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.992
cnbp Danio rerio ENSDARG00000070922 N 0.792
zff9 Danio rerio ENSDARG00000045776 N 0.746
CNBP Cavia porcellus ENSCPOG00000012816 N 0.992
ZCCHC13 Cavia porcellus ENSCPOG00000004667 N 0.776
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.984
ENSCHOG00000003279 Choloepus hoffmanni ENSCHOG00000003279 N 0.824
CNBP Canis familiaris ENSCAFG00000004320 N 0.992
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.992
ENSDORG00000019854 Dipodomys ordii ENSDORG00000019854 N 0.768
LOC100050146 Equus caballus ENSECAG00000009512 N 0.992
ENSETEG00000001978 Echinops telfairi ENSETEG00000001978 N 0.816
CNBP Monodelphis domestica ENSMODG00000008362 N 0.992
CNBP Macaca mulatta ENSMMUG00000011585 N 0.992
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.992
CNBP Macropus eugenii ENSMEUG00000011699 N 0.992
CNBP Loxodonta africana ENSLAFG00000002502 N 0.992
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.984
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 1.000
CNBP Homo sapiens ENSG00000169714 N 0.992
CNBP Felis catus ENSFCAG00000008665 N 0.992
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.992
CNBP Anolis carolinensis ENSACAG00000013192 N 0.992