CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Tc00.1047053506943.120
(
Trypanosoma cruzi
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Tc00.1047053506943.120
T20460_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Tc00.1047053506943.120
KH
131
178
KRRDRLVGPKAQTLKALEILTGCYVLVQGKTVAVMGPVKGCQQVRKIV
Links
Other
KH
family RBPs
Other
Trypanosoma cruzi
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_802051.1
Strongylocentrotus purpuratus
XP_802051.1
N
0.000
e_gw1.17.191.1
Trichoderma reesei
e_gw1.17.191.1
N
0.000
e_gw1.10.746.1
Trichoderma virens
e_gw1.10.746.1
N
0.000
NCU00210
Neurospora crassa
NCU00210
N
0.000
NCBP2_IXOSC
Ixodes scapularis
ISCW017479
N
0.000
GE25514
Drosophila yakuba
FBgn0242580
N
0.000
GK11244
Drosophila willistoni
FBgn0213255
N
0.000
GJ23276
Drosophila virilis
FBgn0210378
N
0.000
GD19204
Drosophila simulans
FBgn0190709
N
0.000
GM15280
Drosophila sechellia
FBgn0170200
N
0.000
GL12592
Drosophila persimilis
FBgn0150198
N
0.000
GI23717
Drosophila mojavensis
FBgn0146442
N
0.000
GH15101
Drosophila grimshawi
FBgn0122576
N
0.000
e_gw1.3.1174.1
Thielavia terrestris
e_gw1.3.1174.1
N
0.000
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
Nectria haematococca
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
N
0.000
XP_001187788.1
Strongylocentrotus purpuratus
XP_001187788.1
N
0.000
Pa_7_2520
Podospora anserina
Pa_7_2520
N
0.000
BGIBMGA007585
Bombyx mori
BGIBMGA007585
N
0.000
EAT82863.2
Phaeosphaeria nodorum
EAT82863.2
N
0.000
gw.93.114.1
Branchiostoma floridae
gw.93.114.1
N
0.000
gw.81.90.1
Branchiostoma floridae
gw.81.90.1
N
0.000
gw1.29.143.1
Phycomyces blakesleeanus
gw1.29.143.1
N
0.000
gw1.14.317.1
Chlorella NC64A
gw1.14.317.1
N
0.000
estExt_Genewise1Plus.C_50921
Neurospora discreta
estExt_Genewise1Plus.C_50921
N
0.000
estExt_Genewise1Plus.C_40730
Myceliophthora thermophila
estExt_Genewise1Plus.C_40730
N
0.000
estExt_Genewise1Plus.C_150343
Trichoderma atroviride
estExt_Genewise1Plus.C_150343
N
0.000
estExt_Genewise1.C_10147
Cochliobolus heterostrophus C5
estExt_Genewise1.C_10147
N
0.000
GG22670
Drosophila erecta
FBgn0114835
N
0.000
GF16759
Drosophila ananassae
FBgn0093780
N
0.000
GA11577-RA
Drosophila pseudoobscura
FBgn0071628
N
0.000
TERG_03424
Trichophyton rubrum
TERG_03424
N
0.000
TEQG_01953
Trichophyton equinum
TEQG_01953
N
0.000
SNOG_09598
Stagonospora nodorum
SNOG_09598
N
0.000
PTRG_00402
Pyrenophora tritici repentis
PTRG_00402
N
0.000
PABG_07236
Paracoccidioides brasiliensis
PABG_07236
N
0.000
MGYG_02166
Microsporum gypseum
MGYG_02166
N
0.000
MGG_06296
Magnaporthe oryzae
MGG_06296
N
0.000
MCYG_04468
Microsporum canis
MCYG_04468
N
0.000
HCAG_07341
Histoplasma capsulatum
HCAG_07341
N
0.000
GLRG_00177
Colletotrichum graminicola
GLRG_00177
N
0.000
CPSG_08054
Coccidioides posadasii
CPSG_08054
N
0.000
CIMG_00837
Coccidioides immitis
CIMG_00837
N
0.000
amel4_ncbi_hmm3188
Apis mellifera
amel4_ncbi_hmm3188
N
0.000
nasonia_NCBI_hmm134534
Nasonia vitripennis
nasonia_NCBI_hmm134534
N
0.000
Cbp20
Drosophila melanogaster
FBgn0022943
N
0.000
ncbp2
Xenopus tropicalis
ENSXETG00000019384
N
0.000
B5G279_TAEGU
Taeniopygia guttata
ENSTGUG00000007323
N
0.000
ENSMGAG00000002257
Meleagris gallopavo
ENSMGAG00000002257
N
0.000
NCBP2_CHICK
Gallus gallus
ENSGALG00000005753
N
0.000
ncbp2
Danio rerio
ENSDARG00000014898
N
0.000
ENSACAG00000015128
Anolis carolinensis
ENSACAG00000015128
N
0.000
NFIA_084190
Neosartorya fischeri
CADNFIAG00008064
N
0.000
AFUA_2G08570
Aspergillus fumigatus
CADAFUAG00004718
N
0.000
AFLA_046450
Aspergillus flavus
CADAFLAG00005972
N
0.000
NCBP2_ANOGA
Anopheles gambiae
AGAP002547
N
0.000
nasonia_NCBI_hmm1532803
Nasonia vitripennis
nasonia_NCBI_hmm1532803
N
0.000
BDBG_08091
Blastomyces dermatitidis
BDBG_08091
N
0.000