BGIBMGA007585 (Bombyx mori)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIBMGA007585 T55006_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA007585 RRM 39 109

Links

Other RRM family RBPs
Other Bombyx mori RBPs

156 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.915
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.887
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.873
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.859
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.859
PHUM535920 Pediculus humanus PHUM535920 N 0.845
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.845
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.845
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.831
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.831
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.831
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.831
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.831
NCBP2 Homo sapiens ENSG00000114503 N 0.831
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.831
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.831
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.831
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.831
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.831
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.831
NCBP2 Equus caballus ENSECAG00000016153 N 0.831
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.831
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.831
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.831
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.831
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.831
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.831
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.831
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.831
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.831
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.831
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.831
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.831
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.831
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.817
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.817
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.817
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.817
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.817
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.817
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.817
NCBP2 Gallus gallus ENSGALG00000006843 N 0.817
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.817
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.817
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.817
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.817
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.803
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.803
91084 Helobdella robusta 91084 N 0.803
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.803
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.803
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.803
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.803
LOAG_03270 Loa loa LOAG_03270 N 0.803
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.803
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.789
GE25514 Drosophila yakuba FBgn0242580 N 0.789
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.789
GI23717 Drosophila mojavensis FBgn0146442 N 0.789
GG22670 Drosophila erecta FBgn0114835 N 0.789
GF16759 Drosophila ananassae FBgn0093780 N 0.789
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.789
Cbp20 Drosophila melanogaster FBgn0022943 N 0.789
GH15101 Drosophila grimshawi FBgn0122576 N 0.789
GL12592 Drosophila persimilis FBgn0150198 N 0.789
GJ23276 Drosophila virilis FBgn0210378 N 0.789
GD19204 Drosophila simulans FBgn0190709 N 0.789
GM15280 Drosophila sechellia FBgn0170200 N 0.789
GK11244 Drosophila willistoni FBgn0213255 N 0.789
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.789
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.789
Bm1_02935 Brugia malayi Bm1_02935 N 0.789
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.789
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.789
GJ18756 Drosophila virilis FBgn0205908 N 0.775
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.775
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.775
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.775
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.775
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.775
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.761
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.761
P52299 Xenopus laevis P52299 N 0.761
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.761
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.761
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.761
ncbp2 Danio rerio ENSDARG00000014898 N 0.761
AAH72902 Xenopus laevis AAH72902 N 0.761
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.761
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.746
Minc02990 Meloidogyne incognita Minc02990 N 0.746
Minc06129 Meloidogyne incognita Minc06129 N 0.746
2118330B Xenopus laevis 2118330B N 0.746
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.746
CAA59259 Xenopus laevis CAA59259 N 0.746
NCBP2 Sorex araneus ENSSARG00000014294 N 0.746
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.746
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.732
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.732
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.732
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.732
SB04G025800 Sorghum bicolor Sb04g025800 N 0.732
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.732
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.718
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.718
NCU00210 Neurospora crassa NCU00210 N 0.718
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.718
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.718
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.718
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.718
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.718
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.718
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.718
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.718
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.718
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.718
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.718
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.718
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.704
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.704
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.704
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.704
TERG_03424 Trichophyton rubrum TERG_03424 N 0.704
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.704
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.704
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.704
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.704
CBG22194 Caenorhabditis briggsae CBG22194 N 0.704
CBN14593 Caenorhabditis brenneri CBN14593 N 0.704
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.704
CRE20447 Caenorhabditis remanei CRE20447 N 0.704
An12g03930 Aspergillus niger CADANGAG00009835 N 0.704
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.704
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.704
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.704
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.704
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.704
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.704
ppa010346m Prunus persica ppa010346m N 0.704
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.704
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.704
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.704
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.704
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.704
ncbp-2 Caenorhabditis elegans F26A3.2 N 0.704
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.704
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.704
SNAPOd2T00014922001 Oikopleura dioica SNAPOd2T00014922001 N 0.704
MDP0000315402 Malus x domestica MDP0000315402 N 0.704
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.704
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.704
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.704
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.704
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.704
MCYG_04468 Microsporum canis MCYG_04468 N 0.704
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.704