GRMZM2G125531 (Zea mays)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GRMZM2G125531 T21374_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G125531_P01 KH 144 206
GRMZM2G125531_P02 KH 136 199
GRMZM2G125531_P03 KH 144 203

Links

Other KH family RBPs
Other Zea mays RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa009341m Prunus persica ppa009341m N 0.731
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.762
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.746
Cucsa.334300 Cucumis sativus Cucsa.334300 N 0.738
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.778
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.714
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.714
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.714
cassava30587.valid.m1 Manihot esculenta cassava30587.valid.m1 N 0.731
Glyma04g12370.1 Glycine max Glyma04g12370.1 N 0.716
Glyma06g48070.1 Glycine max Glyma06g48070.1 N 0.727
GRMZM2G029029 Zea mays GRMZM2G029029 N 0.708
MDP0000306088 Malus x domestica MDP0000306088 N 0.746
MDP0000300654 Malus x domestica MDP0000300654 N 0.713
MDP0000077749 Malus x domestica MDP0000077749 N 0.704
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.764
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.730
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.810
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.712
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.877
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.817
BRADI3G56540 Brachypodium distachyon BRADI3G56540 N 0.712
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.873
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.938
BGIOSIBCE008472 Oryza indica BGIOSIBCE008472 N 0.723
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.937
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.746
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.762
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.794
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.778
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.762
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.746
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.817
SB09G020640 Sorghum bicolor Sb09g020640 N 0.728
SB04G029520 Sorghum bicolor Sb04g029520 N 0.723
SB03G042090 Sorghum bicolor Sb03g042090 N 0.937
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.938
LOC_Os02g49080 Oryza sativa LOC_Os02g49080 N 0.723
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.937
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.841
PK16956.1 Cannabis sativa PK16956.1 N 0.701