CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_05189
(
Fusarium oxysporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FOXG_05189
T29294_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_05189T0
RRM
84
153
IFVGNVDYSASPEDIQSHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIK
Links
Other
RRM
family RBPs
Other
Fusarium oxysporum
RBPs
55 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PNPT1
Anolis carolinensis
ENSACAG00000003692
N
0.000
PNPT1
Oryzias latipes
ENSORLG00000004335
N
0.000
PNPT1
Procavia capensis
ENSPCAG00000010806
N
0.000
ENSPPYG00000012399
Pongo pygmaeus
ENSPPYG00000012399
N
0.000
PNPT1
Pan troglodytes
ENSPTRG00000011934
N
0.000
Pnpt1
Rattus norvegicus
ENSRNOG00000003600
N
0.000
PNPT1
Sus scrofa
ENSSSCG00000008399
N
0.000
PNPT1
Spermophilus tridecemlineatus
ENSSTOG00000006304
N
0.000
PNPT1
Taeniopygia guttata
ENSTGUG00000006908
N
0.000
PNPT1
Tetraodon nigroviridis
ENSTNIG00000007460
N
0.000
PNPT1
Takifugu rubripes
ENSTRUG00000005495
N
0.000
PNPT1
Tursiops truncatus
ENSTTRG00000000029
N
0.000
PNPT1
Vicugna pacos
ENSVPAG00000007097
N
0.000
pnpt1
Xenopus tropicalis
ENSXETG00000006075
N
0.000
Ame_R001792
Ailuropoda melanoleuca
Ame_R001792
N
0.000
XP_001192933.1
Strongylocentrotus purpuratus
XP_001192933.1
N
0.000
PNPT1
Ochotona princeps
ENSOPRG00000010232
N
0.000
PNPT1
Oryctolagus cuniculus
ENSOCUG00000006889
N
0.000
Pnpt1
Mus musculus
ENSMUSG00000020464
N
0.000
PNPT1
Bos taurus
ENSBTAG00000008909
N
0.000
PNPT1
Canis familiaris
ENSCAFG00000002891
N
0.000
PNPT1
Choloepus hoffmanni
ENSCHOG00000007360
N
0.000
PNPT1
Callithrix jacchus
ENSCJAG00000009740
N
0.000
PNPT1
Cavia porcellus
ENSCPOG00000011008
N
0.000
LOC100052355
Equus caballus
ENSECAG00000020058
N
0.000
PNPT1
Echinops telfairi
ENSETEG00000001582
N
0.000
PNPT1
Felis catus
ENSFCAG00000013236
N
0.000
PNPT1
Homo sapiens
ENSG00000138035
N
0.000
PNPT1
Gasterosteus aculeatus
ENSGACG00000010840
N
0.000
PNPT1
Gallus gallus
ENSGALG00000007935
N
0.000
PNPT1
Gorilla gorilla
ENSGGOG00000006867
N
0.000
PNPT1
Meleagris gallopavo
ENSMGAG00000001952
N
0.000
PNPT1
Myotis lucifugus
ENSMLUG00000003886
N
0.000
PNPT1
Monodelphis domestica
ENSMODG00000001984
N
0.000
XP_788673.2
Strongylocentrotus purpuratus
XP_788673.2
N
0.000