CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ACLA_024590
(
Aspergillus clavatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADACLAG00002524
T33366_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00002477
RRM
119
192
VYVTSIPLDAEFEEIRDVFSKCGVIAEEIDSGRPRIKMYMDEDGKFKGEALVVYFRPESVNLAIQMLDDSDFRL
CADACLAP00002477
RRM
283
338
KQDIRDECSKLGEVTNVVLYDKEPDGVASVRFVDPEAARQCVRVMDGRFFAGTRVE
Links
Other
RRM
family RBPs
Other
Aspergillus clavatus
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCBI_GNO_14600006
Daphnia pulex
NCBI_GNO_14600006
N
0.000
Minc00467
Meloidogyne incognita
Minc00467
N
0.000