An08g04280 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00006749 T33559_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00006623 RRM 93 165
CADANGAP00006623 RRM 186 256
CADANGAP00006623 RRM 312 376

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_098010 Penicillium marneffei PMAA_098010 N 0.923
estExt_Genewise1.C_11570 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11570 N 0.873
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.868
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.876
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.914
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.885
e_gw1.2.1591.1 Mycosphaerella graminicola e_gw1.2.1591.1 N 0.895
NCU07874 Neurospora crassa NCU07874 N 0.914
NFIA_013530 Neosartorya fischeri CADNFIAG00000800 N 0.952
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.967
estExt_Genewise1.C_140496 Mycosphaerella fijiensis estExt_Genewise1.C_140496 N 0.890
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.909
Pc12g15120 Penicillium chrysogenum Pc12g15120 N 0.933
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.900
GSTUMT00010135001 Tuber melanosporum GSTUMT00010135001 N 0.909
fgenesh1_pm.00083_#_553 Aspergillus carbonarius fgenesh1_pm.00083_#_553 N 0.986
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.895
AB00309.1 Alternaria brassicicola AB00309.1 N 0.883
EAT81850.2 Phaeosphaeria nodorum EAT81850.2 N 0.873
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.876
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 Nectria haematococca estExt_Genewise1Plus.C_sca_10_chr8_2_00705 N 0.890
AO090001000353 Aspergillus oryzae CADAORAG00000317 N 0.957
ANIA_10164 Aspergillus nidulans CADANIAG00001543 N 0.952
MGYG_03339 Microsporum gypseum MGYG_03339 N 0.915
MCYG_03737 Microsporum canis MCYG_03737 N 0.923
HCAG_09244 Histoplasma capsulatum HCAG_09244 N 0.809
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.880
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.871
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.871
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.847
CPSG_01385 Coccidioides posadasii CPSG_01385 N 0.933
CIMG_09023 Coccidioides immitis CIMG_09023 N 0.938
PABG_03400 Paracoccidioides brasiliensis PABG_03400 N 0.928
PTRG_10065 Pyrenophora tritici repentis PTRG_10065 N 0.873
AFUA_1G12000 Aspergillus fumigatus CADAFUAG00007354 N 0.775
AFLA_067600 Aspergillus flavus CADAFLAG00008184 N 0.957
ACLA_023580 Aspergillus clavatus CADACLAG00002187 N 0.952
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.828
TESG_05056 Trichophyton tonsurans TESG_05056 N 0.771
TERG_05178 Trichophyton rubrum TERG_05178 N 0.928
TEQG_03955 Trichophyton equinum TEQG_03955 N 0.928
SS1G_03339 Sclerotinia sclerotiorum SS1G_03339 N 0.895
SNOG_10456 Stagonospora nodorum SNOG_10456 N 0.873
CHGG_05573 Chaetomium globosum CHGG_05573 N 0.756